RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 RPTORQ8N122 1335 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 GOLGB1Q14789 3259 aaKnown RBP16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 SMCHD1A6NHR9 2005 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 ANKRD62A6NC57 917 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 ASNSP08243 561 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 ITGA4P13612 1032 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 NIPA1Q7RTP0 329 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 C10orf67Q8IYJ2 551 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 LARGE2Q8N3Y3 721 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 SH2D3CQ8N5H7 860 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 SLC16A10Q8TF71 515 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 TMEM174Q8WUU8 243 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 LRRC45Q96CN5 670 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 ACCSQ96QU6 501 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 AMACRQ9UHK6 382 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 DBR1Q9UK59 544 aaKnown RBP16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 PPP1R9AQ9ULJ8 1098 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 PLAAQ9Y263 795 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 ZNF536O15090 1300 aa16.33■□□□□ 0.2
TNFSF13-201ENST00000338784 FOXN3O00409 490 aaPredicted RBP16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 TRIM66O15016 1216 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 P4HA2O15460 535 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 DHX15O43143 795 aaKnown RBP16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 SKIDA1Q1XH10 827 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 KDM7AQ6ZMT4 941 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 FAM83AQ86UY5 434 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 MCF2L2Q86YR7 1114 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 RTKN2Q8IZC4 609 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 BCAS4Q8TDM0 211 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 VTI1AQ96AJ9 217 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 AGPAT1Q99943 283 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 RASSF4Q9H2L5 321 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 PCIF1Q9H4Z3 704 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 COL20A1Q9P218 1284 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 SAMM50Q9Y512 469 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 EMSYQ7Z589 1322 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 IGSF9BQ9UPX0 1349 aa16.32■□□□□ 0.2
TNFSF13-201ENST00000338784 NFIBO00712 420 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 DDX3YO15523 660 aaKnown RBP16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 LRRN2O75325 713 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 FGGP02679 453 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 PLS3P13797 630 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 INPP5BP32019 993 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 RARRES1P49788 294 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 VAMP7P51809 220 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 DLG4P78352 724 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 EMC10Q5UCC4 262 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 LRIG3Q6UXM1 1119 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 DDX42Q86XP3 938 aaKnown RBP eCLIP16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 C12orf56Q8IXR9 622 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 IL31RAQ8NI17 732 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 ATP6V1G3Q96LB4 118 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 THAP2Q9H0W7 228 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 AGO4Q9HCK5 861 aaKnown RBP16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 UBE2TQ9NPD8 197 aaPredicted RBP16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 TAS2R14Q9NYV8 317 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 GOLGA6L10A6NI86 522 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 HMGB1P1B2RPK0 211 aaPredicted RBP16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 HSD17B3P37058 310 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 QARSP47897 775 aaKnown RBP16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 ITGB3BPQ13352 177 aaPredicted RBP16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 TKFCQ3LXA3 575 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 CEP85LQ5SZL2 805 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 TTC19Q6DKK2 380 aaPredicted RBP16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 PRPF38AQ8NAV1 312 aaKnown RBP16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 PROCA1Q8NCQ7 364 aaPredicted RBP16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 CLEC4DQ8WXI8 215 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 ARHGEF26Q96DR7 871 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 PSMD1Q99460 953 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 ZNF341Q9BYN7 854 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 CARD9Q9H257 536 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 UBIAD1Q9Y5Z9 338 aa16.31■□□□□ 0.2
TNFSF13-201ENST00000338784 RBBP6Q7Z6E9 1792 aaKnown RBP16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 TISP43B9A030 160 aa16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 CCT5P48643 541 aa16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 ATP1A2P50993 1020 aa16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 PCNX4Q63HM2 1172 aa16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 PALB2Q86YC2 1186 aa16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 RHOT2Q8IXI1 618 aa16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 TTLL6Q8N841 843 aa16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 XXYLT1Q8NBI6 393 aa16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 MTMR14Q8NCE2 650 aa16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 SEC14L1Q92503 715 aa16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 NAP1L3Q99457 506 aaPredicted RBP16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 CBWD1Q9BRT8 395 aa16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 UTP11Q9Y3A2 253 aaKnown RBP16.3■□□□□ 0.2
TNFSF13-201ENST00000338784 EBAG9O00559 213 aa16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 TTI1O43156 1089 aa16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 DAPK3O43293 454 aa16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 LYPLA2O95372 231 aa16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 NR1D1P20393 614 aa16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 GHRHRQ02643 423 aa16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 MAP3K10Q02779 954 aa16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 PPP3CAQ08209 521 aa16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 PDCLQ13371 301 aa16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 MTMR1Q13613 665 aa16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 NEUROG2Q9H2A3 272 aa16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 ZNF277Q9NRM2 450 aaPredicted RBP16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 TBC1D22BQ9NU19 505 aa16.29■□□□□ 0.2
TNFSF13-201ENST00000338784 HSPBP1Q9NZL4 362 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms