RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 PADI3Q9ULW8 664 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 ST3GAL5Q9UNP4 418 aa16.98■□□□□ 0.31
SEC13-201ENST00000337354 TRIP12Q14669 1992 aaPredicted RBP16.98■□□□□ 0.31
SEC13-201ENST00000337354 KAT6AQ92794 2004 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 PVALEFA0A1B0GWK0 134 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 FRMD3A2A2Y4 597 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 CCDC169A6NNP5 214 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 TRAK2O60296 914 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 KINO60870 393 aaKnown RBP16.97■□□□□ 0.31
SEC13-201ENST00000337354 EFCAB14O75071 495 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 NR1I2O75469 434 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 FGBP02675 491 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 MAPTP10636 758 aaKnown RBP16.97■□□□□ 0.31
SEC13-201ENST00000337354 ACTN1P12814 892 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 LIG1P18858 919 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 BMP8BP34820 402 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 AFMP43652 599 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
SEC13-201ENST00000337354 NFX1Q12986 1120 aaKnown RBP16.97■□□□□ 0.31
SEC13-201ENST00000337354 ZHX3Q9H4I2 956 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 CHST12Q9NRB3 414 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 PANK4Q9NVE7 773 aa16.97■□□□□ 0.31
SEC13-201ENST00000337354 SCN5AQ14524 2016 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 ABHD14A-ACY1A0A1B0GW23 586 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 A0A1W2PPC1 479 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 INO80B-WBP1J3KQ70 363 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 K7ERI5 159 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 GTPBP6O43824 516 aaPredicted RBP16.96■□□□□ 0.31
SEC13-201ENST00000337354 IDEP14735 1019 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 CD52P31358 61 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 IKBKEQ14164 716 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 MAPK6Q16659 721 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 HERC4Q5GLZ8 1057 aaPredicted RBP16.96■□□□□ 0.31
SEC13-201ENST00000337354 UNC13DQ70J99 1090 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 C16orf59Q7L2K0 433 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 FAM228AQ86W67 206 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 TDHQ8IZJ6 230 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 VWCEQ96DN2 955 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 PRIMPOLQ96LW4 560 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 OSBPL7Q9BZF2 842 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 FZD8Q9H461 694 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 TMEM134Q9H6X4 195 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 ERVK-5Q9HDB9 667 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 OLFML3Q9NRN5 406 aa16.96■□□□□ 0.31
SEC13-201ENST00000337354 BAIAP3O94812 1187 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 ACRP10323 421 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 AXLP30530 894 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 ASIC1P78348 528 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 MBTD1Q05BQ5 628 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 CUL4BQ13620 913 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 FAM187BQ17R55 369 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 ZNF365Q70YC5 407 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 CATSPER4Q7RTX7 472 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 FAM178BQ8IXR5 827 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 MTIF3Q9H2K0 278 aaKnown RBP16.95■□□□□ 0.3
SEC13-201ENST00000337354 ST6GALNAC4Q9H4F1 302 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 PRMT7Q9NVM4 692 aaPredicted RBP16.95■□□□□ 0.3
SEC13-201ENST00000337354 DACT1Q9NYF0 836 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 ARHGAP28Q9P2N2 729 aa16.95■□□□□ 0.3
SEC13-201ENST00000337354 ERLIN2O94905 339 aa16.94■□□□□ 0.3
SEC13-201ENST00000337354 ZSCAN20P17040 1043 aaPredicted RBP16.94■□□□□ 0.3
SEC13-201ENST00000337354 EPHB4P54760 987 aa16.94■□□□□ 0.3
SEC13-201ENST00000337354 NCKAP1LP55160 1127 aa16.94■□□□□ 0.3
SEC13-201ENST00000337354 POSTNQ15063 836 aa16.94■□□□□ 0.3
SEC13-201ENST00000337354 TMEM240Q5SV17 173 aa16.94■□□□□ 0.3
SEC13-201ENST00000337354 PPP4R3CPQ6ZMV5 832 aa16.94■□□□□ 0.3
SEC13-201ENST00000337354 ZNF720Q7Z2F6 126 aa16.94■□□□□ 0.3
SEC13-201ENST00000337354 HAUS6Q7Z4H7 955 aa16.94■□□□□ 0.3
SEC13-201ENST00000337354 TMEM161BQ8NDZ6 487 aa16.94■□□□□ 0.3
SEC13-201ENST00000337354 CCDC47Q96A33 483 aaKnown RBP16.94■□□□□ 0.3
SEC13-201ENST00000337354 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.94■□□□□ 0.34e-14■■□□□ 12.8
SEC13-201ENST00000337354 BLZF1Q9H2G9 400 aa16.94■□□□□ 0.3
SEC13-201ENST00000337354 MINDY3Q9H8M7 445 aa16.94■□□□□ 0.3
SEC13-201ENST00000337354 WDR81Q562E7 1941 aa16.94■□□□□ 0.3
SEC13-201ENST00000337354 ACKR2O00590 384 aa16.93■□□□□ 0.3
SEC13-201ENST00000337354 SLC16A4O15374 487 aa16.93■□□□□ 0.3
SEC13-201ENST00000337354 CSDE1O75534 798 aaKnown RBP16.93■□□□□ 0.3
SEC13-201ENST00000337354 MCM4P33991 863 aa16.93■□□□□ 0.3
SEC13-201ENST00000337354 DPYDQ12882 1025 aa16.93■□□□□ 0.3
SEC13-201ENST00000337354 PSMD2Q13200 908 aa16.93■□□□□ 0.3
SEC13-201ENST00000337354 ALCAMQ13740 583 aa16.93■□□□□ 0.3
SEC13-201ENST00000337354 GRAMD1CQ8IYS0 662 aa16.93■□□□□ 0.3
SEC13-201ENST00000337354 HERVK_113Q902F9 699 aa16.93■□□□□ 0.3
SEC13-201ENST00000337354 FIZ1Q96SL8 496 aa16.93■□□□□ 0.3
SEC13-201ENST00000337354 CCDC113Q9H0I3 377 aa16.93■□□□□ 0.3
SEC13-201ENST00000337354 MRPL44Q9H9J2 332 aaKnown RBP16.93■□□□□ 0.3
SEC13-201ENST00000337354 ADGRA3Q8IWK6 1321 aa16.93■□□□□ 0.3
SEC13-201ENST00000337354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.92■□□□□ 0.3
SEC13-201ENST00000337354 DENND3A2RUS2 1198 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 SMC2O95347 1197 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 PTMSP20962 102 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 GTF2BQ00403 316 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 STRN3Q13033 797 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 STXBP4Q6ZWJ1 553 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 OTOP2Q7RTS6 562 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 SFR1Q86XK3 245 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 KIFC3Q9BVG8 833 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 TRAIPQ9BWF2 469 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 TMX1Q9H3N1 280 aa16.92■□□□□ 0.3
SEC13-201ENST00000337354 C1orf112Q9NSG2 853 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms