RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 DENND3A2RUS2 1198 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 AGPSO00116 658 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 ZBED4O75132 1171 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 SGPL1O95470 568 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 H2AFZP0C0S5 128 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 ADSSP30520 456 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 VAMP7P51809 220 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 ZNF131P52739 623 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 C1orf220Q5T0J3 134 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 H2AFVQ71UI9 128 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 SLC30A5Q8TAD4 765 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 OLIG1Q8TAK6 271 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 SLC35G2Q8TBE7 412 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 TAF4BQ92750 862 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 TMEM143Q96AN5 459 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 BICD1Q96G01 975 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 KIAA1683Q9H0B3 1180 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 DPH5Q9H2P9 285 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 PICK1Q9NRD5 415 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 STIM2Q9P246 746 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 LARSQ9P2J5 1176 aaKnown RBP9.61□□□□□ -0.87
SNCA-201ENST00000336904 COG5Q9UP83 839 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 CYP26A1O43174 497 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 EIF3JO75822 258 aaKnown RBP9.61□□□□□ -0.87
SNCA-201ENST00000336904 KRT13P13646 458 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 PTPRAP18433 802 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 WNT7BP56706 349 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 SP2Q02086 613 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 PCNX4Q63HM2 1172 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 MCTP2Q6DN12 878 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 SLC47A2Q86VL8 602 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 CCDC60Q8IWA6 550 aaPredicted RBP9.61□□□□□ -0.87
SNCA-201ENST00000336904 TPCN2Q8NHX9 752 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 CASKIN2Q8WXE0 1202 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 RIT2Q99578 217 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 PAGR1Q9BTK6 254 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 APEX2Q9UBZ4 518 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 AMACRQ9UHK6 382 aa9.61□□□□□ -0.87
SNCA-201ENST00000336904 EIF3DO15371 548 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNCA-201ENST00000336904 SLC16A3O15427 465 aaKnown RBP9.6□□□□□ -0.87
SNCA-201ENST00000336904 KIF4AO95239 1232 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 NPTX2P47972 431 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 BACE1P56817 501 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 TREML2Q5T2D2 321 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 NLRX1Q86UT6 975 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 ARL8AQ96BM9 186 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 INPP4AQ96PE3 977 aaPredicted RBP9.6□□□□□ -0.87
SNCA-201ENST00000336904 NUCKS1Q9H1E3 243 aaKnown RBP9.6□□□□□ -0.87
SNCA-201ENST00000336904 NOC2LQ9Y3T9 749 aaKnown RBP9.6□□□□□ -0.87
SNCA-201ENST00000336904 PCDHGC5Q9Y5F6 944 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 PFASO15067 1338 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 RPTORQ8N122 1335 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 ZC3H4Q9UPT8 1303 aaKnown RBP9.6□□□□□ -0.87
SNCA-201ENST00000336904 GOLGA6BA6NDN3 693 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 CTNND1O60716 968 aaKnown RBP9.6□□□□□ -0.87
SNCA-201ENST00000336904 PPP1R37O75864 691 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 PLS3P13797 630 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 TNFAIP3P21580 790 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 GUCY2CP25092 1073 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 MARK3P27448 753 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 NF2P35240 595 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 ACOT2P49753 483 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 ATP1A2P50993 1020 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 HIRAP54198 1017 aaPredicted RBP9.6□□□□□ -0.87
SNCA-201ENST00000336904 SPOPLQ6IQ16 392 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 CCDC70Q6NSX1 233 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 RPUSD2Q8IZ73 545 aaKnown RBP9.6□□□□□ -0.87
SNCA-201ENST00000336904 ZNF280CQ8ND82 737 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 SYN2Q92777 582 aaPredicted RBP9.6□□□□□ -0.87
SNCA-201ENST00000336904 IQCDQ96DY2 449 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 ZBTB45Q96K62 511 aaPredicted RBP9.6□□□□□ -0.87
SNCA-201ENST00000336904 PPP1R16BQ96T49 567 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 FAM213AQ9BRX8 229 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 TRIM51Q9BSJ1 452 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 EDEM3Q9BZQ6 932 aa9.6□□□□□ -0.87
SNCA-201ENST00000336904 A1CFQ9NQ94 594 aaKnown RBP9.6□□□□□ -0.87
SNCA-201ENST00000336904 MMEP08473 750 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 FLT3P36888 993 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 TNFAIP1Q13829 316 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 ZBTB41Q5SVQ8 909 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 TMEM63BQ5T3F8 832 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 WDR78Q5VTH9 848 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 CDR2LQ86X02 465 aaPredicted RBP9.59□□□□□ -0.87
SNCA-201ENST00000336904 MCF2L2Q86YR7 1114 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 MMGT1Q8N4V1 131 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 LRRC57Q8N9N7 239 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 TAS1R2Q8TE23 839 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 AENQ8WTP8 325 aaKnown RBP9.59□□□□□ -0.87
SNCA-201ENST00000336904 POMGNT1Q8WZA1 660 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 TATDN2Q93075 761 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 TMEM117Q9H0C3 514 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 NEUROG2Q9H2A3 272 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 LRRC4CQ9HCJ2 640 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 LUC7LQ9NQ29 371 aaKnown RBP9.59□□□□□ -0.87
SNCA-201ENST00000336904 DMAC2Q9NW81 257 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 ODF2LQ9ULJ1 636 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 ADM5C9JUS6 153 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 HNRNPDLO14979 420 aaKnown RBP9.59□□□□□ -0.87
SNCA-201ENST00000336904 ATP8B1O43520 1251 aa9.59□□□□□ -0.87
SNCA-201ENST00000336904 HMGB2P26583 209 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms