RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 MYBL1P10243 752 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 KRT15P19012 456 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 KLRC1P26715 233 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 ZBTB16Q05516 673 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 LRRC14Q15048 493 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 SMAD1Q15797 465 aaKnown RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 CASC4Q6P4E1 433 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 KCNK18Q7Z418 384 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 SYCE1Q8N0S2 351 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 ZNF713Q8N859 430 aaPredicted RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 CCDC197Q8NCU1 140 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 SLC30A5Q8TAD4 765 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 TMEM143Q96AN5 459 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 FAM20AQ96MK3 541 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 IWS1Q96ST2 819 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 NAP1L3Q99457 506 aaPredicted RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 CELF4Q9BZC1 486 aaKnown RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 A0A1W2PQC6 194 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 HMGB1P1B2RPK0 211 aaPredicted RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 POLRMTO00411 1230 aaKnown RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 PCK1P35558 622 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 QARSP47897 775 aaKnown RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 SOX10P56693 466 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 GRB10Q13322 594 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 DGKZQ13574 1117 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 SLC15A2Q16348 729 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 HHIPL2Q6UWX4 724 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 APTXQ7Z2E3 356 aaKnown RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 FAM160B2Q86V87 743 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 SPATS2Q86XZ4 545 aaKnown RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 CTAGE3PQ8IX95 158 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 CASKIN2Q8WXE0 1202 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 RNF34Q969K3 372 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 VPS37BQ9H9H4 285 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 INTS9Q9NV88 658 aaKnown RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 DOT1LQ8TEK3 1739 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 ADAMTS3O15072 1205 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 EPHB6O15197 1021 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 RPS6KA5O75582 802 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 ARP10275 920 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 MAPK4P31152 587 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 PBX1P40424 430 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 USP11P51784 963 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 SESN3P58005 492 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 BRDTQ58F21 947 aaPredicted RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 DENND2CQ68D51 928 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 HAUS6Q7Z4H7 955 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 ZBTB8OSQ8IWT0 167 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 AENQ8WTP8 325 aaKnown RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 ATG4CQ96DT6 458 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 DNAJC7Q99615 494 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 PACSIN1Q9BY11 444 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 NSRP1Q9H0G5 558 aaKnown RBP6.97□□□□□ -1.29
HMG20A-201ENST00000336216 RNF181Q9P0P0 153 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 TSKSQ9UJT2 592 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 SNX24Q9Y343 169 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 EMSYQ7Z589 1322 aa6.97□□□□□ -1.29
HMG20A-201ENST00000336216 RIC1Q4ADV7 1423 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 MYH8P13535 1937 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 NUP188Q5SRE5 1749 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.96□□□□□ -1.29
HMG20A-201ENST00000336216 FAM237AA0A1B0GTK4 181 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 ENO4A6NNW6 628 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 PIK3R2O00459 728 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 OPLAHO14841 1288 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 FERP16591 822 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 GAP43P17677 238 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 PAX7P23759 505 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 SHMT1P34896 483 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 GMPSP49915 693 aaPredicted RBP6.96□□□□□ -1.29
HMG20A-201ENST00000336216 RPS6P62753 249 aaKnown RBP6.96□□□□□ -1.29
HMG20A-201ENST00000336216 PDIA5Q14554 519 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 APOBEC3HQ6NTF7 200 aaKnown RBP6.96□□□□□ -1.29
HMG20A-201ENST00000336216 MMGT1Q8N4V1 131 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 XXYLT1Q8NBI6 393 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 FAM149B1Q96BN6 582 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 MTRQ99707 1265 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 NRBP2Q9NSY0 501 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 PAPPAQ13219 1627 aa6.96□□□□□ -1.29
HMG20A-201ENST00000336216 TJP1Q07157 1748 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 NRAPQ86VF7 1730 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 NFIBO00712 420 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 MSH4O15457 936 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 SART1O43290 800 aaKnown RBP6.96□□□□□ -1.3
HMG20A-201ENST00000336216 MFAP3P55082 362 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 NFX1Q12986 1120 aaKnown RBP6.96□□□□□ -1.3
HMG20A-201ENST00000336216 RSBN1LQ6PCB5 846 aaPredicted RBP6.96□□□□□ -1.3
HMG20A-201ENST00000336216 IRF2BP1Q8IU81 584 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 SUGP1Q8IWZ8 645 aaKnown RBP6.96□□□□□ -1.3
HMG20A-201ENST00000336216 GDAP1Q8TB36 358 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 WHAMMQ8TF30 809 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 PURBQ96QR8 312 aaKnown RBP6.96□□□□□ -1.3
HMG20A-201ENST00000336216 FAM118BQ9BPY3 351 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 TRIM51Q9BSJ1 452 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 PI4K2AQ9BTU6 479 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 GLIS2Q9BZE0 524 aaPredicted RBP6.96□□□□□ -1.3
HMG20A-201ENST00000336216 PLCB1Q9NQ66 1216 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 GGA3Q9NZ52 723 aa6.96□□□□□ -1.3
HMG20A-201ENST00000336216 PNMA2Q9UL42 364 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms