RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 LXNQ9BS40 222 aa15.04■□□□□ -0
SF1-202ENST00000334944 PCIF1Q9H4Z3 704 aa15.04■□□□□ -0
SF1-202ENST00000334944 TYW1Q9NV66 732 aaKnown RBP15.04■□□□□ -0
SF1-202ENST00000334944 ATP6V1G2O95670 118 aa15.04■□□□□ -0
SF1-202ENST00000334944 MARSP56192 900 aaKnown RBP15.04■□□□□ -0
SF1-202ENST00000334944 CAPRIN2Q6IMN6 1127 aaKnown RBP15.04■□□□□ -0
SF1-202ENST00000334944 DEFB132Q7Z7B7 95 aa15.04■□□□□ -0
SF1-202ENST00000334944 FAM178BQ8IXR5 827 aa15.04■□□□□ -0
SF1-202ENST00000334944 RPGRIP1Q96KN7 1286 aa15.04■□□□□ -0
SF1-202ENST00000334944 POLR3CQ9BUI4 534 aaPredicted RBP15.04■□□□□ -0
SF1-202ENST00000334944 STK32BQ9NY57 414 aa15.04■□□□□ -0
SF1-202ENST00000334944 ZMYM2Q9UBW7 1377 aa15.04■□□□□ -0
SF1-202ENST00000334944 PIK3CDO00329 1044 aa15.03■□□□□ -0
SF1-202ENST00000334944 PDXKO00764 312 aa15.03■□□□□ -0
SF1-202ENST00000334944 CYP3A4P08684 503 aa15.03■□□□□ -0
SF1-202ENST00000334944 ALAS1P13196 640 aa15.03■□□□□ -0
SF1-202ENST00000334944 PRELPP51888 382 aa15.03■□□□□ -0
SF1-202ENST00000334944 DPY19L2P1Q6NXN4 242 aa15.03■□□□□ -0
SF1-202ENST00000334944 PIK3R5Q8WYR1 880 aa15.03■□□□□ -0
SF1-202ENST00000334944 HVCN1Q96D96 273 aa15.03■□□□□ -0
SF1-202ENST00000334944 SEC16BQ96JE7 1060 aa15.03■□□□□ -0
SF1-202ENST00000334944 PARVGQ9HBI0 331 aa15.03■□□□□ -0
SF1-202ENST00000334944 ASTN2O75129 1339 aaPredicted RBP15.03■□□□□ -0
SF1-202ENST00000334944 SORBS3O60504 671 aa15.03■□□□□ -0
SF1-202ENST00000334944 ANP32DO95626 131 aa15.03■□□□□ -0
SF1-202ENST00000334944 CAP2P40123 477 aa15.03■□□□□ -0
SF1-202ENST00000334944 ELF3P78545 371 aaPredicted RBP15.03■□□□□ -0
SF1-202ENST00000334944 EPHA7Q15375 998 aa15.03■□□□□ -0
SF1-202ENST00000334944 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
SF1-202ENST00000334944 ODF2Q5BJF6 829 aa15.03■□□□□ -0
SF1-202ENST00000334944 FRMD5Q7Z6J6 570 aa15.03■□□□□ -0
SF1-202ENST00000334944 TBC1D1Q86TI0 1168 aaPredicted RBP15.03■□□□□ -0
SF1-202ENST00000334944 FAM186BQ8IYM0 893 aa15.03■□□□□ -0
SF1-202ENST00000334944 IQCKQ8N0W5 287 aa15.03■□□□□ -0
SF1-202ENST00000334944 ZSWIM2Q8NEG5 633 aa15.03■□□□□ -0
SF1-202ENST00000334944 CHURC1Q8WUH1 139 aa15.03■□□□□ -0
SF1-202ENST00000334944 ELMO3Q96BJ8 720 aa15.03■□□□□ -0
SF1-202ENST00000334944 HOOK2Q96ED9 719 aa15.03■□□□□ -0
SF1-202ENST00000334944 GMLQ99445 158 aa15.03■□□□□ -0
SF1-202ENST00000334944 RAVER2Q9HCJ3 691 aaKnown RBP15.03■□□□□ -0
SF1-202ENST00000334944 GGT7Q9UJ14 662 aa15.03■□□□□ -0
SF1-202ENST00000334944 GRID2IPA4D2P6 1211 aa15.03■□□□□ -0
SF1-202ENST00000334944 PJA2O43164 708 aa15.03■□□□□ -0
SF1-202ENST00000334944 NAB2Q15742 525 aa15.03■□□□□ -0
SF1-202ENST00000334944 PRAMEF18Q5VWM3 479 aa15.03■□□□□ -0
SF1-202ENST00000334944 PPP4R3CPQ6ZMV5 832 aa15.03■□□□□ -0
SF1-202ENST00000334944 VIL1P09327 827 aaKnown RBP15.02■□□□□ -0
SF1-202ENST00000334944 TCP1P17987 556 aaKnown RBP15.02■□□□□ -0
SF1-202ENST00000334944 EIF2AK2P19525 551 aaKnown RBP15.02■□□□□ -0
SF1-202ENST00000334944 PAFAH1B1P43034 410 aa15.02■□□□□ -0
SF1-202ENST00000334944 PLCB4Q15147 1175 aa15.02■□□□□ -0
SF1-202ENST00000334944 CBWD6Q4V339 395 aa15.02■□□□□ -0
SF1-202ENST00000334944 CBWD3Q5JTY5 395 aa15.02■□□□□ -0
SF1-202ENST00000334944 CBWD5Q5RIA9 395 aa15.02■□□□□ -0
SF1-202ENST00000334944 ZNF772Q68DY9 489 aaPredicted RBP15.02■□□□□ -0
SF1-202ENST00000334944 IQCEQ6IPM2 695 aa15.02■□□□□ -0
SF1-202ENST00000334944 KLHL7Q8IXQ5 586 aa15.02■□□□□ -0
SF1-202ENST00000334944 SYCP3Q8IZU3 236 aa15.02■□□□□ -0
SF1-202ENST00000334944 SUPT20HQ8NEM7 779 aa15.02■□□□□ -0
SF1-202ENST00000334944 ATP6V1G3Q96LB4 118 aa15.02■□□□□ -0
SF1-202ENST00000334944 EDEM3Q9BZQ6 932 aa15.02■□□□□ -0
SF1-202ENST00000334944 RANBP17Q9H2T7 1088 aaKnown RBP15.02■□□□□ -0
SF1-202ENST00000334944 SIX2Q9NPC8 291 aa15.02■□□□□ -0
SF1-202ENST00000334944 AIPL1Q9NZN9 384 aa15.02■□□□□ -0
SF1-202ENST00000334944 G3BP2Q9UN86 482 aaKnown RBP15.02■□□□□ -0
SF1-202ENST00000334944 PLAAQ9Y263 795 aa15.02■□□□□ -0
SF1-202ENST00000334944 GMNCA6NCL1 334 aa15.02□□□□□ -0.01
SF1-202ENST00000334944 WNT10BO00744 389 aa15.02□□□□□ -0.01
SF1-202ENST00000334944 DIAPH2O60879 1101 aa15.02□□□□□ -0.01
SF1-202ENST00000334944 LGR5O75473 907 aa15.02□□□□□ -0.01
SF1-202ENST00000334944 SLC8A1P32418 973 aa15.02□□□□□ -0.01
SF1-202ENST00000334944 CXCL9Q07325 125 aa15.02□□□□□ -0.01
SF1-202ENST00000334944 ARHGAP44Q17R89 818 aa15.02□□□□□ -0.01
SF1-202ENST00000334944 EMBQ6PCB8 327 aa15.02□□□□□ -0.01
SF1-202ENST00000334944 ZC3H3Q8IXZ2 948 aaKnown RBP15.02□□□□□ -0.01
SF1-202ENST00000334944 MMGT1Q8N4V1 131 aa15.02□□□□□ -0.01
SF1-202ENST00000334944 SLC5A5Q92911 643 aa15.02□□□□□ -0.01
SF1-202ENST00000334944 SEPT11Q9NVA2 429 aaKnown RBP15.02□□□□□ -0.01
SF1-202ENST00000334944 TRPC6Q9Y210 931 aa15.02□□□□□ -0.01
SF1-202ENST00000334944 MRPL11Q9Y3B7 192 aaKnown RBP15.02□□□□□ -0.01
SF1-202ENST00000334944 RBAK-RBAKDNI3L0D1 243 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 HIP1RO75146 1068 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 HEXIM1O94992 359 aaKnown RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 RPL13P26373 211 aaKnown RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 ITGB3BPQ13352 177 aaPredicted RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 BYSLQ13895 437 aaKnown RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 CDCA2Q69YH5 1023 aaPredicted RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 ALKBH5Q6P6C2 394 aaKnown RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 U2AF1L4Q8WU68 220 aaKnown RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 KCNH7Q9NS40 1196 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 ARHGEF35A5YM69 484 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 DCDC2CA8MYV0 355 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 KCNK3O14649 394 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 MYCLP12524 364 aaPredicted RBP15.01□□□□□ -0.01
SF1-202ENST00000334944 ABCB4P21439 1286 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 RASA3Q14644 834 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 GNPTABQ3T906 1256 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 ZNF570Q96NI8 536 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 KRT12Q99456 494 aa15.01□□□□□ -0.01
SF1-202ENST00000334944 ACTR5Q9H9F9 607 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms