RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 IFT122Q9HBG6 1241 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 PCDHB13Q9Y5F0 798 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 UBE4BO95155 1302 aa23.68■■□□□ 1.38
TPM1-204ENST00000334895 PSMA7O14818 248 aa23.67■■□□□ 1.38
TPM1-204ENST00000334895 CAVIN2O95810 425 aa23.67■■□□□ 1.38
TPM1-204ENST00000334895 PPP1R2P41236 205 aa23.67■■□□□ 1.38
TPM1-204ENST00000334895 TMEM62Q0P6H9 643 aa23.67■■□□□ 1.38
TPM1-204ENST00000334895 ALCAMQ13740 583 aa23.67■■□□□ 1.38
TPM1-204ENST00000334895 L1TD1Q5T7N2 865 aaKnown RBP23.67■■□□□ 1.38
TPM1-204ENST00000334895 CENPPQ6IPU0 288 aa23.67■■□□□ 1.38
TPM1-204ENST00000334895 RNF214Q8ND24 703 aa23.67■■□□□ 1.38
TPM1-204ENST00000334895 TRPV6Q9H1D0 765 aa23.67■■□□□ 1.38
TPM1-204ENST00000334895 ADAMTS10Q9H324 1103 aa23.67■■□□□ 1.38
TPM1-204ENST00000334895 KCNG1Q9UIX4 513 aa23.67■■□□□ 1.38
TPM1-204ENST00000334895 TBX20Q9UMR3 447 aa23.67■■□□□ 1.38
TPM1-204ENST00000334895 A0A087WZ62 844 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 GPR32O75388 356 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 CCNE1P24864 410 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 NLRP11P59045 1033 aaKnown RBP23.66■■□□□ 1.38
TPM1-204ENST00000334895 PTENP60484 403 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 TFDP1Q14186 410 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 NCAPHQ15003 741 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 KNOP1Q1ED39 458 aaKnown RBP23.66■■□□□ 1.38
TPM1-204ENST00000334895 ZCWPW2Q504Y3 356 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 ANKLE1Q8NAG6 615 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 DHX38Q92620 1227 aaKnown RBP23.66■■□□□ 1.38
TPM1-204ENST00000334895 P2RX5Q93086 422 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 FDXACB1Q9BRP7 624 aaPredicted RBP23.66■■□□□ 1.38
TPM1-204ENST00000334895 SENP6Q9GZR1 1112 aaPredicted RBP23.66■■□□□ 1.38
TPM1-204ENST00000334895 CCDC113Q9H0I3 377 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 RWDD2AQ9UIY3 292 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 B4GALT4O60513 344 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 EDN1P05305 212 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 POU5F1BQ06416 359 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 KIZQ2M2Z5 673 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 TTI2Q6NXR4 508 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 STXBP4Q6ZWJ1 553 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 LUZP1Q86V48 1076 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 IFNLR1Q8IU57 520 aaPredicted RBP23.66■■□□□ 1.38
TPM1-204ENST00000334895 MAP4K3Q8IVH8 894 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 AOPEPQ8N6M6 819 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 HVCN1Q96D96 273 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 NFKBIZQ9BYH8 718 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 MINDY3Q9H8M7 445 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 CDHR5Q9HBB8 845 aa23.66■■□□□ 1.38
TPM1-204ENST00000334895 H0YCG3 227 aa23.65■■□□□ 1.38
TPM1-204ENST00000334895 TGFB1I1O43294 461 aa23.65■■□□□ 1.38
TPM1-204ENST00000334895 ANKRD40Q6AI12 368 aa23.65■■□□□ 1.38
TPM1-204ENST00000334895 PAWRQ96IZ0 340 aaKnown RBP23.65■■□□□ 1.38
TPM1-204ENST00000334895 TMEM134Q9H6X4 195 aa23.65■■□□□ 1.38
TPM1-204ENST00000334895 RBAK-RBAKDNI3L0D1 243 aa23.64■■□□□ 1.38
TPM1-204ENST00000334895 KIF20AO95235 890 aa23.64■■□□□ 1.38
TPM1-204ENST00000334895 MBTD1Q05BQ5 628 aa23.64■■□□□ 1.38
TPM1-204ENST00000334895 PTK7Q13308 1070 aa23.64■■□□□ 1.38
TPM1-204ENST00000334895 TRIM71Q2Q1W2 868 aaKnown RBP23.64■■□□□ 1.38
TPM1-204ENST00000334895 RPAINQ86UA6 219 aa23.64■■□□□ 1.38
TPM1-204ENST00000334895 ZNF410Q86VK4 478 aa23.64■■□□□ 1.38
TPM1-204ENST00000334895 FAM126BQ8IXS8 530 aa23.64■■□□□ 1.38
TPM1-204ENST00000334895 NME8Q8N427 588 aa23.64■■□□□ 1.38
TPM1-204ENST00000334895 ENOX1Q8TC92 643 aaKnown RBP23.64■■□□□ 1.38
TPM1-204ENST00000334895 NLRP7Q8WX94 980 aa23.64■■□□□ 1.38
TPM1-204ENST00000334895 ACCSQ96QU6 501 aa23.64■■□□□ 1.38
TPM1-204ENST00000334895 DUSP9Q99956 384 aaKnown RBP23.64■■□□□ 1.38
TPM1-204ENST00000334895 SEZ6LQ9BYH1 1024 aa23.64■■□□□ 1.38
TPM1-204ENST00000334895 PHLPP2Q6ZVD8 1323 aa23.64■■□□□ 1.37
TPM1-204ENST00000334895 IQCF3P0C7M6 154 aa23.63■■□□□ 1.37
TPM1-204ENST00000334895 PHKA2P46019 1235 aa23.63■■□□□ 1.37
TPM1-204ENST00000334895 MYL5Q02045 173 aa23.63■■□□□ 1.37
TPM1-204ENST00000334895 UBE2Q1Q7Z7E8 422 aa23.63■■□□□ 1.37
TPM1-204ENST00000334895 ZBTB8OSQ8IWT0 167 aa23.63■■□□□ 1.37
TPM1-204ENST00000334895 C2orf40Q9H1Z8 148 aa23.63■■□□□ 1.37
TPM1-204ENST00000334895 USP20Q9Y2K6 914 aa23.63■■□□□ 1.37
TPM1-204ENST00000334895 TISP43B9A030 160 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 K7ERI5 159 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 IKBKBO14920 756 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 CSDE1O75534 798 aaKnown RBP23.62■■□□□ 1.37
TPM1-204ENST00000334895 SCP2P22307 547 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 EFNA5P52803 228 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 ATN1P54259 1190 aaPredicted RBP23.62■■□□□ 1.37
TPM1-204ENST00000334895 SLC39A5Q6ZMH5 540 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 HSD3B7Q9H2F3 369 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 NOD1Q9Y239 953 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 TTLL13PA6NNM8 815 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 PDXKO00764 312 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 MRPS6P82932 125 aaKnown RBP23.62■■□□□ 1.37
TPM1-204ENST00000334895 CDC42EP1Q00587 391 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 SNX17Q15036 470 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 SLC39A4Q6P5W5 647 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 OSMRQ99650 979 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 FZD8Q9H461 694 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 TMEM206Q9H813 350 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 TYW1Q9NV66 732 aaKnown RBP23.62■■□□□ 1.37
TPM1-204ENST00000334895 TRAF3IP3Q9Y228 551 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 GINS2Q9Y248 185 aa23.62■■□□□ 1.37
TPM1-204ENST00000334895 FSD2A1L4K1 749 aa23.61■■□□□ 1.37
TPM1-204ENST00000334895 CD4P01730 458 aa23.61■■□□□ 1.37
TPM1-204ENST00000334895 ABCD1P33897 745 aa23.61■■□□□ 1.37
TPM1-204ENST00000334895 LRRC63Q05C16 580 aa23.61■■□□□ 1.37
TPM1-204ENST00000334895 MGAT3Q09327 533 aa23.61■■□□□ 1.37
TPM1-204ENST00000334895 SPATA1Q5VX52 437 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms