RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 STK33Q9BYT3 514 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZSCAN16Q9H4T2 348 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 EXD2Q9NVH0 621 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 KIAA1468Q9P260 1216 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZNF624Q9P2J8 865 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 CROTQ9UKG9 612 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 HBS1LQ9Y450 684 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 CFAP74Q9C0B2 1584 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 GEMIN4P57678 1058 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 MORC3Q14149 939 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 LMBRD2Q68DH5 695 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 PCGF5Q86SE9 256 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 SCYL3Q8IZE3 742 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 CNNM3Q8NE01 707 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 C1orf50Q9BV19 199 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZNF263O14978 683 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 CHP2O43745 196 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 SSX5O60225 188 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 SRP72O76094 671 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 AHSA1O95433 338 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 POLR2BP30876 1174 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 SULT1E1P49888 294 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 IMPG1Q17R60 797 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 ETFRF1Q6IPR1 90 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 GLYCTKQ8IVS8 523 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 CDKL3Q8IVW4 592 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 TMEM87AQ8NBN3 555 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 UXS1Q8NBZ7 420 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 TEKT5Q96M29 485 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 C12orf4Q9NQ89 552 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 OLFML3Q9NRN5 406 aa6.44□□□□□ -1.38
CDC42BPA-201ENST00000334218 IFT88Q13099 833 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 CYP26C1Q6V0L0 522 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 SPATA6LQ8N4H0 392 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 THRSPQ92748 146 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 HAVCR1Q96D42 359 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 ATXN10Q9UBB4 475 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 POFUT2Q9Y2G5 429 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 EPN2O95208 641 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 CDC27P30260 824 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 DNAJC7Q99615 494 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 ROGDIQ9GZN7 287 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 NPHS2Q9NP85 383 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 IFNA14P01570 189 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 STOMP27105 288 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 NR1H3Q13133 447 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 MREGQ8N565 214 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 C12orf50Q8NA57 414 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 OR4C6Q8NH72 309 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 C6orf62Q9GZU0 229 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 KIAA0556O60303 1618 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 RAB19A4D1S5 217 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 MAPK3P27361 379 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 RGS6P49758 472 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 GNGT1P63211 74 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 CUL4AQ13619 759 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 C16orf72Q14CZ0 275 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 CNNM4Q6P4Q7 775 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 PRPF39Q86UA1 669 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 ALKBH8Q96BT7 664 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 PRAM1Q96QH2 718 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 PANX2Q96RD6 677 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 NHEJ1Q9H9Q4 299 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 LRP2BPQ9P2M1 347 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 GLS2Q9UI32 602 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 TSTD3H0UI37 97 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 SUPT3HO75486 399 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 GHRP10912 638 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 SCP2P22307 547 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 CSNK2BP67870 215 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 KNOP1Q1ED39 458 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 RGS9BPQ6ZS82 235 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZNF554Q86TJ5 538 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 ACAT2Q9BWD1 397 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 SERHL2Q9H4I8 314 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 TAS2R1Q9NYW7 299 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 SPATA7Q9P0W8 599 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 VILLO15195 856 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 PEX1O43933 1283 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 COX4I1P13073 169 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 RORAP35398 523 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 IFNAR2P48551 515 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 PDAP1Q13442 181 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 ARMCX5Q6P1M9 558 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 IYDQ6PHW0 289 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 BRSK1Q8TDC3 778 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 TRPC4APQ8TEL6 797 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 NLRP2Q9NX02 1062 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 ARPP21Q9UBL0 812 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 FLVCR2Q9UPI3 526 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 RPH3AQ9Y2J0 694 aaPredicted RBP6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 CYP46A1Q9Y6A2 500 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 MYH8P13535 1937 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 MYH15Q9Y2K3 1946 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 RAB4AP20338 218 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 CHKAP35790 457 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 GDI2P50395 445 aaKnown RBP6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 PYHIN1Q6K0P9 492 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 BORAQ6PGQ7 559 aa6.43□□□□□ -1.38
CDC42BPA-201ENST00000334218 S100ZQ8WXG8 99 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms