RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 AEBP2Q6ZN18 517 aaPredicted RBP20.54■□□□□ 0.88
RFTN1-201ENST00000334133 RUFY1Q96T51 708 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 HSPBP1Q9NZL4 362 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 AMACRQ9UHK6 382 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 USP20Q9Y2K6 914 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 NR2E1Q9Y466 385 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 TMEM110-MUSTN1A8MSY1 372 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 ANKRD65E5RJM6 399 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 KRIT1O00522 736 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 ERVK-9P63128 1117 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 EMBQ6PCB8 327 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 LMO3Q8TAP4 145 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 ZBED3Q96IU2 234 aaPredicted RBP20.54■□□□□ 0.88
RFTN1-201ENST00000334133 CELF4Q9BZC1 486 aaKnown RBP20.54■□□□□ 0.88
RFTN1-201ENST00000334133 KCND2Q9NZV8 630 aa20.54■□□□□ 0.88
RFTN1-201ENST00000334133 MAP2K1Q02750 393 aaPredicted RBP20.53■□□□□ 0.88
RFTN1-201ENST00000334133 BAATQ14032 418 aaPredicted RBP20.53■□□□□ 0.88
RFTN1-201ENST00000334133 IFI16Q16666 785 aaKnown RBP20.53■□□□□ 0.88
RFTN1-201ENST00000334133 ARHGEF16Q5VV41 709 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 PCNX4Q63HM2 1172 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 LRRC31Q6UY01 552 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 RNF207Q6ZRF8 634 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 NT5DC3Q86UY8 548 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 MCF2L2Q86YR7 1114 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 BTNL10A8MVZ5 291 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 HSF2BPO75031 334 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 PLS3P13797 630 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 TNNC1P63316 161 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 AADACL2Q6P093 401 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 CBWD2Q8IUF1 395 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 KCTD17Q8N5Z5 321 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 FAM76AQ8TAV0 307 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 GOLGA5Q8TBA6 731 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 CTNNBL1Q8WYA6 563 aaPredicted RBP20.53■□□□□ 0.88
RFTN1-201ENST00000334133 TRIM31Q9BZY9 425 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 PSME4Q14997 1843 aa20.53■□□□□ 0.88
RFTN1-201ENST00000334133 ANKRD63C9JTQ0 380 aa20.52■□□□□ 0.88
RFTN1-201ENST00000334133 SART1O43290 800 aaKnown RBP20.52■□□□□ 0.88
RFTN1-201ENST00000334133 GLE1Q53GS7 698 aaKnown RBP20.52■□□□□ 0.88
RFTN1-201ENST00000334133 TTMPQ5BVD1 217 aa20.52■□□□□ 0.88
RFTN1-201ENST00000334133 MTMR14Q8NCE2 650 aa20.52■□□□□ 0.88
RFTN1-201ENST00000334133 LCMT1Q9UIC8 334 aa20.52■□□□□ 0.88
RFTN1-201ENST00000334133 COG5Q9UP83 839 aa20.52■□□□□ 0.88
RFTN1-201ENST00000334133 ATMINO43313 823 aaPredicted RBP20.52■□□□□ 0.88
RFTN1-201ENST00000334133 CALCAP01258 141 aa20.52■□□□□ 0.88
RFTN1-201ENST00000334133 ADRB2P07550 413 aa20.52■□□□□ 0.88
RFTN1-201ENST00000334133 PAK2Q13177 524 aa20.52■□□□□ 0.88
RFTN1-201ENST00000334133 PPP2R5AQ15172 486 aa20.52■□□□□ 0.88
RFTN1-201ENST00000334133 C1orf220Q5T0J3 134 aa20.52■□□□□ 0.88
RFTN1-201ENST00000334133 ACCSQ96QU6 501 aa20.52■□□□□ 0.88
RFTN1-201ENST00000334133 PDCD2LQ9BRP1 358 aa20.52■□□□□ 0.88
RFTN1-201ENST00000334133 TOPORSQ9NS56 1045 aaPredicted RBP20.52■□□□□ 0.88
RFTN1-201ENST00000334133 PGRMC1O00264 195 aaKnown RBP20.52■□□□□ 0.87
RFTN1-201ENST00000334133 BCRP11274 1271 aa20.52■□□□□ 0.87
RFTN1-201ENST00000334133 NFIL3Q16649 462 aa20.52■□□□□ 0.87
RFTN1-201ENST00000334133 TMOD4Q9NZQ9 345 aa20.52■□□□□ 0.87
RFTN1-201ENST00000334133 RGS17Q9UGC6 210 aaPredicted RBP20.52■□□□□ 0.87
RFTN1-201ENST00000334133 LMNB1P20700 586 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 LLGL1Q15334 1064 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 XXYLT1Q8NBI6 393 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 KIAA1683Q9H0B3 1180 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 DEFB129Q9H1M3 183 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 UBE4BO95155 1302 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 FGGP02679 453 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 ZBTB48P10074 688 aaPredicted RBP20.51■□□□□ 0.87
RFTN1-201ENST00000334133 MUTP22033 750 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 ATP1A2P50993 1020 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 PRKG1Q13976 671 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 MICALL2Q8IY33 904 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 PPM1KQ8N3J5 372 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 NEUROG2Q9H2A3 272 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 TAOK3Q9H2K8 898 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 RSPH14Q9UHP6 348 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 HACL1Q9UJ83 578 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 TMEM59LQ9UK28 342 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 AMFRQ9UKV5 643 aa20.51■□□□□ 0.87
RFTN1-201ENST00000334133 PEX10O60683 326 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 MAP3K10Q02779 954 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 CFAP58Q5T655 872 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 SCFD2Q8WU76 684 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 CAVIN3Q969G5 261 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 PBKQ96KB5 322 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.5■□□□□ 0.87
RFTN1-201ENST00000334133 CENPHQ9H3R5 247 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 PXMP2Q9NR77 195 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 RNF146Q9NTX7 359 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 PIM2Q9P1W9 311 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 STXBP5LQ9Y2K9 1186 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 OR2W6PQ8NHA6 318 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 NEK9Q8TD19 979 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 LPAR1Q92633 364 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 SYT11Q9BT88 431 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 DPH5Q9H2P9 285 aa20.5■□□□□ 0.87
RFTN1-201ENST00000334133 KIF13BQ9NQT8 1826 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 TTI1O43156 1089 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 SGPL1O95470 568 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 DCAF12L1Q5VU92 463 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 INTS8Q75QN2 995 aaKnown RBP20.49■□□□□ 0.87
RFTN1-201ENST00000334133 ANO5Q75V66 913 aa20.49■□□□□ 0.87
RFTN1-201ENST00000334133 SLFN11Q7Z7L1 901 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms