RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 FAM133AQ8N9E0 248 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 PIGOQ8TEQ8 1089 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 HPS5Q9UPZ3 1129 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 ACSL3O95573 720 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 SNAP25P60880 206 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 KCNB1Q14721 858 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 TMEM63BQ5T3F8 832 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 KRT25Q7Z3Z0 450 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 CPSF3Q9UKF6 684 aaKnown RBP10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 RCOR1Q9UKL0 485 aa10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 WBP11Q9Y2W2 641 aaKnown RBP10.96□□□□□ -0.66
SPTBN1-201ENST00000333896 B4E1Z4 1266 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 ANKRD13AQ8IZ07 590 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 PPM1KQ8N3J5 372 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 SNRNP27Q8WVK2 155 aaKnown RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 OTUB1Q96FW1 271 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 CNOT6LQ96LI5 555 aaKnown RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 FOXP1Q9H334 677 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 FBXO28Q9NVF7 368 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 CHPF2Q9P2E5 772 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 FAM153AQ9UHL3 310 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 CCDC195A0A1B0GUA6 201 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 VWA5AO00534 786 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 NUP62P37198 522 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 LIG4P49917 911 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 EPS8Q12929 822 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 ZNF658Q5TYW1 1059 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 FAM47EQ6ZV65 393 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 MTERF3Q96E29 417 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 PANK4Q9NVE7 773 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 KLHL20Q9Y2M5 609 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 SMIM31A0A1B0GVY4 71 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 PLIN5Q00G26 463 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 ANKRD13DQ6ZTN6 518 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 CYGBQ8WWM9 190 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 SCG3Q8WXD2 468 aaKnown RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 KPNA7A9QM74 516 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 CTTNQ14247 550 aaKnown RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 RGS21Q2M5E4 152 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 TRIM69Q86WT6 500 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 SFR1Q86XK3 245 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 MYCBPAPQ8TBZ2 947 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 OTUD5Q96G74 571 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 RXFP1Q9HBX9 757 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 PCDHB4Q9Y5E5 795 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 SCN8AQ9UQD0 1980 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 CDH16O75309 829 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 PSMC3P17980 439 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 DMP1Q13316 513 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 BBS5Q8N3I7 341 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 ROPN1BQ9BZX4 212 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 ROPN1Q9HAT0 212 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 GTSE1Q9NYZ3 720 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 DUOX2Q9NRD8 1548 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 COPEO14579 308 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 TRIM25Q14258 630 aaKnown RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 TRIP4Q15650 581 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 WLSQ5T9L3 541 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 NFRKBQ6P4R8 1299 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 JADE3Q92613 823 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 ZKSCAN4Q969J2 545 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 PPP2R3CQ969Q6 453 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 TRIM45Q9H8W5 580 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 NCOA5Q9HCD5 579 aaKnown RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 ZNF212Q9UDV6 495 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 FKBP6O75344 327 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 ATP5BP06576 529 aaKnown RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 GSTT1P30711 240 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 WASHC2DQ5SRD0 308 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 ARHGAP17Q68EM7 881 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 LRRC8EQ6NSJ5 796 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 PYROXD1Q8WU10 500 aa10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 EZH1Q92800 747 aaPredicted RBP10.95□□□□□ -0.66
SPTBN1-201ENST00000333896 EVPLLA8MZ36 301 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 UBXN8O00124 270 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 TOMM70O94826 608 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 GUCA1CO95843 209 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 LRRC63Q05C16 580 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 GSTA3Q16772 222 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 HEATR4Q86WZ0 1026 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 TTC17Q96AE7 1141 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 HESX1Q9UBX0 185 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 ANXA13P27216 316 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 IKBIPQ70UQ0 350 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 RRM2BQ7LG56 351 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 KRT73Q86Y46 540 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 RASSF5Q8WWW0 418 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 BTBD6Q96KE9 485 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 MMTAG2Q9BU76 263 aaKnown RBP10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 BABAM1Q9NWV8 329 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 LRWD1Q9UFC0 647 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 SNX2O60749 519 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 ALOX5P09917 674 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 STAT4Q14765 748 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 AURKCQ9UQB9 309 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 MAST1Q9Y2H9 1570 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 POTEFA5A3E0 1075 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 PDE9AO76083 593 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 MAPK4P31152 587 aa10.94□□□□□ -0.66
SPTBN1-201ENST00000333896 ARMC3Q5W041 872 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms