RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 N4BP3O15049 544 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 CETN3O15182 167 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 AKAP3O75969 853 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 CHMP4BP1P59074 171 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 MAP2K1Q02750 393 aaPredicted RBP25.51■■□□□ 1.67
TSEN54-201ENST00000333213 LAMTOR4Q0VGL1 99 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 MTHFD1LQ6UB35 978 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 DRC7Q8IY82 874 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 KIAA1524Q8TCG1 905 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 TCP11Q8WWU5 503 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 PSPC1Q8WXF1 523 aaKnown RBP25.51■■□□□ 1.67
TSEN54-201ENST00000333213 KCNN1Q92952 543 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 SETD4Q9NVD3 440 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 EVPLQ92817 2033 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 ADAMTS4O75173 837 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 PBX1P40424 430 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 NKX3-2P78367 333 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 MFSD10Q14728 455 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 HS2ST1Q7LGA3 356 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 VSTM4Q8IW00 320 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 HVCN1Q96D96 273 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 JPH2Q9BR39 696 aaPredicted RBP25.51■■□□□ 1.67
TSEN54-201ENST00000333213 USP20Q9Y2K6 914 aa25.51■■□□□ 1.67
TSEN54-201ENST00000333213 ANKRD63C9JTQ0 380 aa25.5■■□□□ 1.67
TSEN54-201ENST00000333213 EDN1P05305 212 aa25.5■■□□□ 1.67
TSEN54-201ENST00000333213 SMIM10L2AP0DMW4 78 aa25.5■■□□□ 1.67
TSEN54-201ENST00000333213 SMIM10L2BP0DMW5 78 aa25.5■■□□□ 1.67
TSEN54-201ENST00000333213 RARBP10826 455 aa25.5■■□□□ 1.67
TSEN54-201ENST00000333213 MARSP56192 900 aaKnown RBP25.5■■□□□ 1.67
TSEN54-201ENST00000333213 PPP2R5AQ15172 486 aa25.5■■□□□ 1.67
TSEN54-201ENST00000333213 BRDTQ58F21 947 aaPredicted RBP25.5■■□□□ 1.67
TSEN54-201ENST00000333213 GNASQ5JWF2 1037 aa25.5■■□□□ 1.67
TSEN54-201ENST00000333213 DNTTIP2Q5QJE6 756 aaKnown RBP25.5■■□□□ 1.67
TSEN54-201ENST00000333213 SLC39A4Q6P5W5 647 aa25.5■■□□□ 1.67
TSEN54-201ENST00000333213 RHPN2Q8IUC4 686 aa25.5■■□□□ 1.67
TSEN54-201ENST00000333213 ANKRD20A12PQ8NF67 263 aa25.5■■□□□ 1.67
TSEN54-201ENST00000333213 LMBR1Q8WVP7 490 aa25.5■■□□□ 1.67
TSEN54-201ENST00000333213 ADSSP30520 456 aa25.49■■□□□ 1.67
TSEN54-201ENST00000333213 MTIF2P46199 727 aaKnown RBP25.49■■□□□ 1.67
TSEN54-201ENST00000333213 PSEN2P49810 448 aa25.49■■□□□ 1.67
TSEN54-201ENST00000333213 C1QTNF8P60827 252 aa25.49■■□□□ 1.67
TSEN54-201ENST00000333213 TMC6Q7Z403 805 aa25.49■■□□□ 1.67
TSEN54-201ENST00000333213 DEPTORQ8TB45 409 aa25.49■■□□□ 1.67
TSEN54-201ENST00000333213 ZNF668Q96K58 619 aaPredicted RBP25.49■■□□□ 1.67
TSEN54-201ENST00000333213 CBWD1Q9BRT8 395 aa25.49■■□□□ 1.67
TSEN54-201ENST00000333213 MAGEB2O15479 319 aa25.49■■□□□ 1.67
TSEN54-201ENST00000333213 SRGAP2CP0DJJ0 459 aa25.49■■□□□ 1.67
TSEN54-201ENST00000333213 MXD4Q14582 209 aaPredicted RBP25.49■■□□□ 1.67
TSEN54-201ENST00000333213 RNF149Q8NC42 400 aa25.49■■□□□ 1.67
TSEN54-201ENST00000333213 ZSWIM2Q8NEG5 633 aa25.49■■□□□ 1.67
TSEN54-201ENST00000333213 KCNG1Q9UIX4 513 aa25.49■■□□□ 1.67
TSEN54-201ENST00000333213 LGALS16A8MUM7 142 aa25.48■■□□□ 1.67
TSEN54-201ENST00000333213 RPL13P26373 211 aaKnown RBP25.48■■□□□ 1.67
TSEN54-201ENST00000333213 FILIP1LQ4L180 1135 aa25.48■■□□□ 1.67
TSEN54-201ENST00000333213 CEP135Q66GS9 1140 aa25.48■■□□□ 1.67
TSEN54-201ENST00000333213 SLC9A9Q8IVB4 645 aa25.48■■□□□ 1.67
TSEN54-201ENST00000333213 RETREG2Q8NC44 543 aa25.48■■□□□ 1.67
TSEN54-201ENST00000333213 TMEM174Q8WUU8 243 aa25.48■■□□□ 1.67
TSEN54-201ENST00000333213 ZNF830Q96NB3 372 aaPredicted RBP25.48■■□□□ 1.67
TSEN54-201ENST00000333213 NOC4LQ9BVI4 516 aaKnown RBP25.48■■□□□ 1.67
TSEN54-201ENST00000333213 XPNPEP3Q9NQH7 507 aa25.48■■□□□ 1.67
TSEN54-201ENST00000333213 TRIM17Q9Y577 477 aa25.48■■□□□ 1.67
TSEN54-201ENST00000333213 ADAM17P78536 824 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 CDCA2Q69YH5 1023 aaPredicted RBP25.47■■□□□ 1.67
TSEN54-201ENST00000333213 CCDC186Q7Z3E2 898 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 TRIM59Q8IWR1 403 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 GOLGA5Q8TBA6 731 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 BORCS6Q96GS4 357 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 PCIF1Q9H4Z3 704 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 WBP1LQ9NX94 342 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 PTCH2Q9Y6C5 1203 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 SIP14410 1827 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 NRCAMQ92823 1304 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 GNA14O95837 355 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 INHAP05111 366 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 CYP2J2P51589 502 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 CCDC40Q4G0X9 1142 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 CXCL17Q6UXB2 119 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 C12orf56Q8IXR9 622 aa25.47■■□□□ 1.67
TSEN54-201ENST00000333213 H0YCG3 227 aa25.46■■□□□ 1.67
TSEN54-201ENST00000333213 K7ERI5 159 aa25.46■■□□□ 1.67
TSEN54-201ENST00000333213 RBM10P98175 930 aaKnown RBP25.46■■□□□ 1.67
TSEN54-201ENST00000333213 ARID5BQ14865 1188 aa25.46■■□□□ 1.67
TSEN54-201ENST00000333213 VWA3BQ502W6 1294 aa25.46■■□□□ 1.67
TSEN54-201ENST00000333213 CCSAPQ6IQ19 270 aaPredicted RBP25.46■■□□□ 1.67
TSEN54-201ENST00000333213 KLHDC9Q8NEP7 349 aa25.46■■□□□ 1.67
TSEN54-201ENST00000333213 BEGAINQ9BUH8 593 aa25.46■■□□□ 1.67
TSEN54-201ENST00000333213 CCDC113Q9H0I3 377 aa25.46■■□□□ 1.67
TSEN54-201ENST00000333213 TMEM134Q9H6X4 195 aa25.46■■□□□ 1.67
TSEN54-201ENST00000333213 EXOC7Q9UPT5 735 aa25.46■■□□□ 1.67
TSEN54-201ENST00000333213 TTLL13PA6NNM8 815 aa25.45■■□□□ 1.67
TSEN54-201ENST00000333213 DNM2P50570 870 aa25.45■■□□□ 1.67
TSEN54-201ENST00000333213 UBXN1Q04323 297 aa25.45■■□□□ 1.67
TSEN54-201ENST00000333213 ARHGEF6Q15052 776 aa25.45■■□□□ 1.67
TSEN54-201ENST00000333213 MAN2A1Q16706 1144 aa25.45■■□□□ 1.67
TSEN54-201ENST00000333213 NFRKBQ6P4R8 1299 aa25.45■■□□□ 1.67
TSEN54-201ENST00000333213 KIAA0319LQ8IZA0 1049 aa25.45■■□□□ 1.67
TSEN54-201ENST00000333213 DNAJC5GQ8N7S2 189 aa25.45■■□□□ 1.67
TSEN54-201ENST00000333213 NLRP4Q96MN2 994 aa25.45■■□□□ 1.67
TSEN54-201ENST00000333213 DDX20Q9UHI6 824 aaKnown RBP25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms