RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 APTXQ7Z2E3 356 aaKnown RBP13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 CTU1Q7Z7A3 348 aaKnown RBP13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 KIAA0319LQ8IZA0 1049 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 SYCP3Q8IZU3 236 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 RNF149Q8NC42 400 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 CEP63Q96MT8 703 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 PAK6Q9NQU5 681 aaPredicted RBP13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 AGPAT3Q9NRZ7 376 aa13.27□□□□□ -0.29
TRIM49B-201ENST00000332682 C17orf102A2RUQ5 167 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 ASAP2O43150 1006 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 SRGAP2CP0DJJ0 459 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 CDK11BP21127 795 aaKnown RBP13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 NR2F2P24468 414 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 EEF1GP26641 437 aaKnown RBP13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 ZNF75DP51815 510 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 ACLYP53396 1101 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 ZNF200P98182 395 aaPredicted RBP13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 TFDP1Q14186 410 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 TCP11X2Q5H9J9 407 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 RUFY4Q6ZNE9 571 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 GOLGA5Q8TBA6 731 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 ANP32BQ92688 251 aaKnown RBP13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 CNOT6LQ96LI5 555 aaKnown RBP13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 NLRP4Q96MN2 994 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 MAP7D2Q96T17 732 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 TRIM5Q9C035 493 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 CCDC113Q9H0I3 377 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 TMEM134Q9H6X4 195 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 IFNKQ9P0W0 207 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 GTF2IRD1Q9UHL9 959 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 EXOC7Q9UPT5 735 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 AKT3Q9Y243 479 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 BRCA2P51587 3418 aa13.26□□□□□ -0.29
TRIM49B-201ENST00000332682 SMIM35A0A1B0GVV1 85 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 MOXD2PA6NHM9 499 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 TISP43B9A030 160 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 CLIC2O15247 247 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 TREHO43280 583 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 CABYRO75952 493 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 FGFR1OPO95684 399 aaKnown RBP13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 SERPINC1P01008 464 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 VTNP04004 478 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 HSPA1AP0DMV8 641 aaKnown RBP13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 HSPA1BP0DMV9 641 aaKnown RBP13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 GNAT1P11488 350 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 CYP2C9P11712 490 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 EFNA5P52803 228 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 LBX1P52954 281 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 PTENP60484 403 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 POU5F1BQ06416 359 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 ADAM9Q13443 819 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 KRT31Q15323 416 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 MTFR1Q15390 333 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 SLC39A4Q6P5W5 647 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 SESTD1Q86VW0 696 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 FAM114A1Q8IWE2 563 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 ZBTB8OSQ8IWT0 167 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 C12orf56Q8IXR9 622 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 ZNF668Q96K58 619 aaPredicted RBP13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 TSEN34Q9BSV6 310 aaKnown RBP13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 NFKBIZQ9BYH8 718 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 XPO4Q9C0E2 1151 aaKnown RBP13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 FAM49AQ9H0Q0 323 aaPredicted RBP13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 C2orf40Q9H1Z8 148 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 LIMA1Q9UHB6 759 aaKnown RBP13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 GRIN2DO15399 1336 aa13.25□□□□□ -0.29
TRIM49B-201ENST00000332682 K7ERI5 159 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 HNRNPDLO14979 420 aaKnown RBP13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 CETN3O15182 167 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 MYCP01106 439 aaPredicted RBP13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 PIGRP01833 764 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 EDN1P05305 212 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 RPL13P26373 211 aaKnown RBP13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 DEKP35659 375 aaKnown RBP13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 SNRPFP62306 86 aaKnown RBP13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 STRN3Q13033 797 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 FBXO46Q6PJ61 603 aaPredicted RBP13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 IFNLR1Q8IU57 520 aaPredicted RBP13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 SLC9A9Q8IVB4 645 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 TMEM174Q8WUU8 243 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 MRFAP1L1Q96HT8 127 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 PDLIM2Q96JY6 352 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 PPP1R16BQ96T49 567 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 CBWD1Q9BRT8 395 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 IFT122Q9HBG6 1241 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 INTS13Q9NVM9 706 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 DMAC2Q9NW81 257 aa13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 CGNQ9P2M7 1197 aaKnown RBP13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 MAGEC2Q9UBF1 373 aaPredicted RBP13.24□□□□□ -0.29
TRIM49B-201ENST00000332682 A0A087WZ62 844 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 A0A1B0GTH6 734 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 LRRC10BA6NIK2 292 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 ANKRD63C9JTQ0 380 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 AKAP3O75969 853 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 CCL5P13501 91 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 ADSSP30520 456 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 PHKA2P46019 1235 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 CTCFP49711 727 aaPredicted RBP13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 GPC3P51654 580 aa13.23□□□□□ -0.29
TRIM49B-201ENST00000332682 MARSP56192 900 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms