RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 NCAPG2Q86XI2 1143 aa19.61■□□□□ 0.73
SOCS3-201ENST00000330871 ENDOVQ8N8Q3 282 aaKnown RBP19.61■□□□□ 0.73
SOCS3-201ENST00000330871 U2AF1L4Q8WU68 220 aaKnown RBP19.61■□□□□ 0.73
SOCS3-201ENST00000330871 NDNQ99608 321 aa19.61■□□□□ 0.73
SOCS3-201ENST00000330871 TMOD4Q9NZQ9 345 aa19.61■□□□□ 0.73
SOCS3-201ENST00000330871 MINPP1Q9UNW1 487 aa19.61■□□□□ 0.73
SOCS3-201ENST00000330871 CREB3O43889 395 aa19.61■□□□□ 0.73
SOCS3-201ENST00000330871 DYNC1I2Q13409 638 aaKnown RBP19.61■□□□□ 0.73
SOCS3-201ENST00000330871 C10orf76Q5T2E6 689 aa19.61■□□□□ 0.73
SOCS3-201ENST00000330871 BTNL9Q6UXG8 535 aa19.61■□□□□ 0.73
SOCS3-201ENST00000330871 AGGF1Q8N302 714 aaeCLIP19.61■□□□□ 0.73
SOCS3-201ENST00000330871 RBM46Q8TBY0 533 aaKnown RBP19.61■□□□□ 0.73
SOCS3-201ENST00000330871 LARP4BQ92615 738 aaKnown RBP19.61■□□□□ 0.73
SOCS3-201ENST00000330871 DDX12PQ92771 950 aa19.61■□□□□ 0.73
SOCS3-201ENST00000330871 DDX50Q9BQ39 737 aaKnown RBP19.61■□□□□ 0.73
SOCS3-201ENST00000330871 ARMCX3Q9UH62 379 aaPredicted RBP19.61■□□□□ 0.73
SOCS3-201ENST00000330871 CCDC88AQ3V6T2 1871 aa19.61■□□□□ 0.73
SOCS3-201ENST00000330871 KDM4FA0A1W2PPD8 638 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 ANKRD63C9JTQ0 380 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 CRKLP46109 303 aaKnown RBP19.6■□□□□ 0.73
SOCS3-201ENST00000330871 CCDC6Q16204 474 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 SLC35G1Q2M3R5 365 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 KRT25Q7Z3Z0 450 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 MYOCDQ8IZQ8 938 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 TRAPPC9Q96Q05 1148 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 CHKBQ9Y259 395 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 DDX3YO15523 660 aaKnown RBP19.6■□□□□ 0.73
SOCS3-201ENST00000330871 ZSCAN9O15535 394 aaPredicted RBP19.6■□□□□ 0.73
SOCS3-201ENST00000330871 ABCB4P21439 1286 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 KHDC1Q4VXA5 237 aaKnown RBP19.6■□□□□ 0.73
SOCS3-201ENST00000330871 SYCE1Q8N0S2 351 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 LRRC8CQ8TDW0 803 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 SH3RF3Q8TEJ3 882 aaPredicted RBP19.6■□□□□ 0.73
SOCS3-201ENST00000330871 NAP1L3Q99457 506 aaPredicted RBP19.6■□□□□ 0.73
SOCS3-201ENST00000330871 MTRF1LQ9UGC7 380 aaKnown RBP19.6■□□□□ 0.73
SOCS3-201ENST00000330871 PVALEFA0A1B0GWK0 134 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 BRAFP15056 766 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 NONOQ15233 471 aaKnown RBP eCLIP19.6■□□□□ 0.73
SOCS3-201ENST00000330871 RFWD3Q6PCD5 774 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 TRIM59Q8IWR1 403 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 SLC7A6OSQ96CW6 309 aaPredicted RBP19.6■□□□□ 0.73
SOCS3-201ENST00000330871 PNMA5Q96PV4 448 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 PITPNM3Q9BZ71 974 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 TBK1Q9UHD2 729 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 PTPN22Q9Y2R2 807 aa19.6■□□□□ 0.73
SOCS3-201ENST00000330871 FAM187AA6NFU0 413 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 USP17L8P0C7I0 530 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 KCNH2Q12809 1159 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 SETDB1Q15047 1291 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 MTFR1Q15390 333 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 KCNK18Q7Z418 384 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 SCG3Q8WXD2 468 aaKnown RBP19.59■□□□□ 0.73
SOCS3-201ENST00000330871 CDK5RAP3Q96JB5 506 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 GBP5Q96PP8 586 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 TMEM109Q9BVC6 243 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 RIC8AQ9NPQ8 531 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 DNAAF2Q9NVR5 837 aaKnown RBP19.59■□□□□ 0.73
SOCS3-201ENST00000330871 BTG4Q9NY30 223 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 LRCH1Q9Y2L9 728 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 SIGLEC16A6NMB1 481 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 GALCP54803 685 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 ZCWPW2Q504Y3 356 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 SNX30Q5VWJ9 437 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 NRG4Q8WWG1 115 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 TMEM165Q9HC07 324 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 PREBQ9HCU5 417 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 DNAJC17Q9NVM6 304 aaKnown RBP19.59■□□□□ 0.73
SOCS3-201ENST00000330871 CTTNBP2NLQ9P2B4 639 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 SEC63Q9UGP8 760 aaKnown RBP19.59■□□□□ 0.73
SOCS3-201ENST00000330871 RASAL2Q9UJF2 1139 aa19.59■□□□□ 0.73
SOCS3-201ENST00000330871 UBTFL6P0CB48 400 aaPredicted RBP19.58■□□□□ 0.73
SOCS3-201ENST00000330871 UCHL3P15374 230 aa19.58■□□□□ 0.73
SOCS3-201ENST00000330871 PRDX5P30044 214 aa19.58■□□□□ 0.73
SOCS3-201ENST00000330871 FOXN2P32314 431 aa19.58■□□□□ 0.73
SOCS3-201ENST00000330871 HSPA2P54652 639 aa19.58■□□□□ 0.73
SOCS3-201ENST00000330871 MYBPC3Q14896 1274 aa19.58■□□□□ 0.73
SOCS3-201ENST00000330871 SF3B3Q15393 1217 aaKnown RBP19.58■□□□□ 0.73
SOCS3-201ENST00000330871 C12orf60Q5U649 245 aa19.58■□□□□ 0.73
SOCS3-201ENST00000330871 MFSD5Q6N075 450 aa19.58■□□□□ 0.73
SOCS3-201ENST00000330871 NEK8Q86SG6 692 aa19.58■□□□□ 0.73
SOCS3-201ENST00000330871 CROCCP2Q86T23 111 aa19.58■□□□□ 0.73
SOCS3-201ENST00000330871 NUDT12Q9BQG2 462 aa19.58■□□□□ 0.73
SOCS3-201ENST00000330871 LZTS2Q9BRK4 669 aa19.58■□□□□ 0.73
SOCS3-201ENST00000330871 MKNK2Q9HBH9 465 aa19.58■□□□□ 0.73
SOCS3-201ENST00000330871 AJAP1Q9UKB5 411 aaPredicted RBP19.58■□□□□ 0.73
SOCS3-201ENST00000330871 COL4A1P02462 1669 aa19.58■□□□□ 0.72
SOCS3-201ENST00000330871 DDX3XO00571 662 aaKnown RBP eCLIP19.58■□□□□ 0.72
SOCS3-201ENST00000330871 T-ENOLP0DO92 83 aa19.58■□□□□ 0.72
SOCS3-201ENST00000330871 IMPDH2P12268 514 aa19.58■□□□□ 0.72
SOCS3-201ENST00000330871 PTGIRP43119 386 aa19.58■□□□□ 0.72
SOCS3-201ENST00000330871 NAPAP54920 295 aa19.58■□□□□ 0.72
SOCS3-201ENST00000330871 RASIP1Q5U651 963 aa19.58■□□□□ 0.72
SOCS3-201ENST00000330871 SLC35G2Q8TBE7 412 aa19.58■□□□□ 0.72
SOCS3-201ENST00000330871 SPOCK2Q92563 424 aa19.58■□□□□ 0.72
SOCS3-201ENST00000330871 ALG3Q92685 438 aa19.58■□□□□ 0.72
SOCS3-201ENST00000330871 OPTNQ96CV9 577 aa19.58■□□□□ 0.72
SOCS3-201ENST00000330871 LRRC37BQ96QE4 947 aa19.58■□□□□ 0.72
SOCS3-201ENST00000330871 IGSF9BQ9UPX0 1349 aa19.58■□□□□ 0.72
SOCS3-201ENST00000330871 PALM3A6NDB9 673 aaPredicted RBP19.57■□□□□ 0.72
SOCS3-201ENST00000330871 VHLP40337 213 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms