RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NCKAP1LP55160 1127 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 PSMC5P62195 406 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 PAK2Q13177 524 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 ZSCAN26Q16670 478 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 EPC2Q52LR7 807 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 RNF207Q6ZRF8 634 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 DEFB132Q7Z7B7 95 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 DAAM2Q86T65 1068 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 XXYLT1Q8NBI6 393 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 PLEKHO2Q8TD55 490 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 RFFLQ8WZ73 363 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 WNK4Q96J92 1243 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 CCDC43Q96MW1 224 aaKnown RBP15.8■□□□□ 0.12
TPM3-206ENST00000330188 SH3GL2Q99962 352 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 OSGEPQ9NPF4 335 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 CTDP1Q9Y5B0 961 aaPredicted RBP15.8■□□□□ 0.12
TPM3-206ENST00000330188 WDR64B1ANS9 1081 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 NFKBIEO00221 500 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 PGRMC1O00264 195 aaKnown RBP15.8■□□□□ 0.12
TPM3-206ENST00000330188 SLC16A4O15374 487 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 P4HA2O15460 535 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 LRRN2O75325 713 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 FAM153BP0C7A2 387 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 PEX3P56589 373 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 FAM153CQ494X1 144 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 ALS2CLQ60I27 953 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 ARHGEF19Q8IW93 802 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 KLHL7Q8IXQ5 586 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 RASGEF1CQ8N431 466 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 GOLGA6L1Q8N7Z2 621 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 SLC35G2Q8TBE7 412 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 IFT81Q8WYA0 676 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 ATG4CQ96DT6 458 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 HES6Q96HZ4 224 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 CALR3Q96L12 384 aaKnown RBP15.8■□□□□ 0.12
TPM3-206ENST00000330188 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.8■□□□□ 0.123e-15■■■□□ 16.8
TPM3-206ENST00000330188 TAS2R14Q9NYV8 317 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 FAM153AQ9UHL3 310 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 BCS1LQ9Y276 419 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 NOC2LQ9Y3T9 749 aaKnown RBP15.8■□□□□ 0.12
TPM3-206ENST00000330188 RLFQ13129 1914 aa15.8■□□□□ 0.12
TPM3-206ENST00000330188 VWA5AO00534 786 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 MAPK13O15264 365 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 TNFAIP3P21580 790 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 RPS12P25398 132 aaKnown RBP15.79■□□□□ 0.12
TPM3-206ENST00000330188 SFNP31947 248 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 TGFB2P61812 414 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 KRT76Q01546 638 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 PPATQ06203 517 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 ARHGEF16Q5VV41 709 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 PLA2G4FQ68DD2 849 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 NSMFQ6X4W1 530 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 PALB2Q86YC2 1186 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 UBE2TQ9NPD8 197 aaPredicted RBP15.79■□□□□ 0.12
TPM3-206ENST00000330188 ANKEF1Q9NU02 776 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 PNMA2Q9UL42 364 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 TESPA1A2RU30 521 aaPredicted RBP15.79■□□□□ 0.12
TPM3-206ENST00000330188 BUB1BO60566 1050 aaPredicted RBP15.79■□□□□ 0.12
TPM3-206ENST00000330188 FDX1P10109 184 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 ABCB4P21439 1286 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 GCLMP48507 274 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 SNRPFP62306 86 aaKnown RBP15.79■□□□□ 0.12
TPM3-206ENST00000330188 DALRD3Q5D0E6 543 aaKnown RBP15.79■□□□□ 0.12
TPM3-206ENST00000330188 XKR9Q5GH70 373 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 NBPF12Q5TAG4 269 aaPredicted RBP15.79■□□□□ 0.12
TPM3-206ENST00000330188 TRMT1LQ7Z2T5 733 aaKnown RBP15.79■□□□□ 0.12
TPM3-206ENST00000330188 SAMD7Q7Z3H4 446 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 CTNNBL1Q8WYA6 563 aaPredicted RBP15.79■□□□□ 0.12
TPM3-206ENST00000330188 ARHGEF26Q96DR7 871 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 HACL1Q9UJ83 578 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 AMFRQ9UKV5 643 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 RIPK3Q9Y572 518 aa15.79■□□□□ 0.12
TPM3-206ENST00000330188 KIAA1217Q5T5P2 1943 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 HSF2BPO75031 334 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 RPS6KA5O75582 802 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 CLSTN1O94985 981 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 ADRB2P07550 413 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 BAG6P46379 1132 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 CETN1Q12798 172 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 TRADDQ15628 312 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 FAM102BQ5T8I3 360 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 LEKR1Q6ZMV7 388 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 MICALL2Q8IY33 904 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 SLC20A1Q8WUM9 679 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 VTI1AQ96AJ9 217 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 IWS1Q96ST2 819 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 AGPAT1Q99943 283 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 AP1M1Q9BXS5 423 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 RNF146Q9NTX7 359 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 ARID2Q68CP9 1835 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 PHIPQ8WWQ0 1821 aa15.78■□□□□ 0.12
TPM3-206ENST00000330188 ANKRD62A6NC57 917 aa15.77■□□□□ 0.12
TPM3-206ENST00000330188 GOLGA6CA6NDK9 693 aa15.77■□□□□ 0.12
TPM3-206ENST00000330188 GOLGA8KD6RF30 607 aa15.77■□□□□ 0.12
TPM3-206ENST00000330188 GOLGA6DP0CG33 693 aa15.77■□□□□ 0.12
TPM3-206ENST00000330188 BAATQ14032 418 aaPredicted RBP15.77■□□□□ 0.12
TPM3-206ENST00000330188 TBC1D10BQ4KMP7 808 aaPredicted RBP15.77■□□□□ 0.12
TPM3-206ENST00000330188 MREGQ8N565 214 aa15.77■□□□□ 0.12
TPM3-206ENST00000330188 SLC17A8Q8NDX2 589 aa15.77■□□□□ 0.12
TPM3-206ENST00000330188 THAP2Q9H0W7 228 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms