RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CBFA2T2O43439 604 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 GPR32O75388 356 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 ACTN1P12814 892 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 CD52P31358 61 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 NCAPHQ15003 741 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 KIZQ2M2Z5 673 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 GPR153Q6NV75 609 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 UNC13DQ70J99 1090 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 SPRED2Q7Z698 418 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 RTN4RL1Q86UN2 441 aaPredicted RBP18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 TPH2Q8IWU9 490 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 CELF4Q9BZC1 486 aaKnown RBP18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 SUGCTQ9HAC7 445 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 MTMR10Q9NXD2 777 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 PTPRSQ13332 1948 aa18.16■□□□□ 0.5
PDLIM1-201ENST00000329399 SLC34A2O95436 690 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 SPATA31C1P0DKV0 1188 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 PLCB2Q00722 1185 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 IKBKEQ14164 716 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 SPATA1Q5VX52 437 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 FOXR2Q6PJQ5 311 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 RSPH3Q86UC2 560 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 IFIH1Q9BYX4 1025 aaKnown RBP18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 NKX2-4Q9H2Z4 354 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 EXOC1Q9NV70 894 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 RWDD2AQ9UIY3 292 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 GINS2Q9Y248 185 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 TRPV2Q9Y5S1 764 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 LOXHD1Q8IVV2 1947 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 UNC80Q8N2C7 3258 aa18.15■□□□□ 0.5
PDLIM1-201ENST00000329399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 ABHD14A-ACY1A0A1B0GW23 586 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 KLRC4O43908 158 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 BAIAP3O94812 1187 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 ZNF75DP51815 510 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 IER5Q5VY09 327 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 ISM2Q6H9L7 571 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 FAM117BQ6P1L5 589 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 HERC6Q8IVU3 1022 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 NME8Q8N427 588 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 LINC01599Q8WXQ3 324 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 DHTKD1Q96HY7 919 aaPredicted RBP18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 GUCD1Q96NT3 240 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 BLZF1Q9H2G9 400 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 ADAMTS10Q9H324 1103 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 KCND2Q9NZV8 630 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 KIAA1024Q9UPX6 916 aa18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 NOC2LQ9Y3T9 749 aaKnown RBP18.14■□□□□ 0.5
PDLIM1-201ENST00000329399 GBF1Q92538 1859 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 IGKV6-21A0A0C4DH24 114 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 LCHNA4D1U4 455 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 PPP1R3GB7ZBB8 358 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 PSMA7O14818 248 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 MED24O75448 989 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 KIF20AO95235 890 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 ASIC1P78348 528 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 ECM1Q16610 540 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 KMT5BQ4FZB7 885 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 CATSPER3Q86XQ3 398 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 C4orf19Q8IY42 314 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 SEPT8Q92599 483 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 TIFAQ96CG3 184 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 MTIF3Q9H2K0 278 aaKnown RBP18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 TMX1Q9H3N1 280 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 CYP26B1Q9NR63 512 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 PADI3Q9ULW8 664 aa18.14■□□□□ 0.49
PDLIM1-201ENST00000329399 BICDL2A1A5D9 508 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 MAGEB2O15479 319 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 CSDE1O75534 798 aaKnown RBP18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 YWHABP31946 246 aaKnown RBP18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 NLRP11P59045 1033 aaKnown RBP18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 SPAG1Q07617 926 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 TBC1D8BQ0IIM8 1120 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 MCM6Q14566 821 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 GRIN2CQ14957 1233 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 TSHZ1Q6ZSZ6 1077 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 KSR1Q8IVT5 923 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 CCDC65Q8IXS2 484 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 PIGOQ8TEQ8 1089 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 NOC3LQ8WTT2 800 aaKnown RBP18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 STAMQ92783 540 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 NACC1Q96RE7 527 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 PLIN2Q99541 437 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 OSMRQ99650 979 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 ZSWIM4Q9H7M6 989 aa18.13■□□□□ 0.49
PDLIM1-201ENST00000329399 MICAL3Q7RTP6 2002 aa18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 ENPP3O14638 875 aa18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 MGEA5O60502 916 aa18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 DKC1O60832 514 aaKnown RBP eCLIP18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 MAFO75444 373 aaPredicted RBP18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 EYA4O95677 639 aa18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 PTMAP06454 111 aaKnown RBP18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 PLA2G4BP0C869 781 aa18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 PAK1Q13153 545 aa18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 ADSSL1Q8N142 457 aa18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 SYT2Q8N9I0 419 aaPredicted RBP18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 PHOSPHO2Q8TCD6 241 aa18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 CEP170P1Q96L14 293 aa18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 ZNF576Q9H609 170 aa18.12■□□□□ 0.49
PDLIM1-201ENST00000329399 AKT3Q9Y243 479 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms