RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 ZSWIM2Q8NEG5 633 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 SOX7Q9BT81 388 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 CPEB1Q9BZB8 566 aaKnown RBP4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 TANGO6Q9C0B7 1094 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 PITHD1Q9GZP4 211 aaPredicted RBP4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 PCIF1Q9H4Z3 704 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 SYNPO2LQ9H987 977 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 NCOA5Q9HCD5 579 aaKnown RBP4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 SAMD15Q9P1V8 674 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 PTGFRNQ9P2B2 879 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 A0A0A6YYJ9 748 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 CENPVL1A0A0U1RR11 272 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 PTPDC1A2A3K4 754 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 ZAR1LA6NP61 321 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 AHRRA9YTQ3 701 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 MASP2O00187 686 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 B3GALT2O43825 422 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 LPXNO60711 386 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 ATP2B1P20020 1258 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 RBM25P49756 843 aaKnown RBP4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 FAM189BP81408 668 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 EPHA7Q15375 998 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 TIGD2Q4W5G0 525 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 PLEKHG4Q58EX7 1191 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 ESRP1Q6NXG1 681 aaKnown RBP4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 OLFML1Q6UWY5 402 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 UNQ6494/PRO21346Q6UXR6 183 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 KANSL1Q7Z3B3 1105 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 DDX53Q86TM3 631 aaKnown RBP4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 RPGRQ92834 1020 aaKnown RBP4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 ENKD1Q9H0I2 346 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 TOR3AQ9H497 397 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 MTG2Q9H4K7 406 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 ING3Q9NXR8 418 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 PTCH2Q9Y6C5 1203 aa4.74□□□□□ -1.65
CBX3P1-201ENST00000325243 CCDC163A0A0D9SF12 145 aa4.73□□□□□ -1.65
CBX3P1-201ENST00000325243 TRIM24O15164 1050 aa4.73□□□□□ -1.65
CBX3P1-201ENST00000325243 HOXA3O43365 443 aaPredicted RBP4.73□□□□□ -1.65
CBX3P1-201ENST00000325243 RAPGEF3O95398 923 aa4.73□□□□□ -1.65
CBX3P1-201ENST00000325243 CYP17A1P05093 508 aa4.73□□□□□ -1.65
CBX3P1-201ENST00000325243 CLK3P49761 638 aaKnown RBP4.73□□□□□ -1.65
CBX3P1-201ENST00000325243 C21orf58P58505 322 aa4.73□□□□□ -1.65
CBX3P1-201ENST00000325243 CLUHP3Q96NS8 147 aa4.73□□□□□ -1.65
CBX3P1-201ENST00000325243 H7C1D1 291 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 KIAA0355O15063 1070 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 OPHN1O60890 802 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 GAAP10253 952 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 LAG3P18627 525 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 SLC9A1P19634 815 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 GTF2F1P35269 517 aaKnown RBP eCLIP4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 ADCY2Q08462 1091 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 ZNF460Q14592 562 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 Q6YL49 198 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 NME9Q86XW9 330 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 ADGRG3Q86Y34 549 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 PIK3C3Q8NEB9 887 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 OR52N2Q8NGI0 321 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 ARMC5Q96C12 935 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 UIMC1Q96RL1 719 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 CPPED1Q9BRF8 314 aaPredicted RBP4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 MYL10Q9BUA6 226 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 HIRIP3Q9BW71 556 aaPredicted RBP4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 OSBPL6Q9BZF3 934 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 KCNH6Q9H252 994 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 PRDM13Q9H4Q3 707 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 WDR26Q9H7D7 661 aa4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 TNPO3Q9Y5L0 923 aaKnown RBP4.72□□□□□ -1.65
CBX3P1-201ENST00000325243 PPFIA4O75335 1185 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 RECQL4O94761 1208 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 PRPF6O94906 941 aaKnown RBP4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 APOL3O95236 402 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 GYPEP15421 78 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 IGFALSP35858 605 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 RBL2Q08999 1139 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 ZNF174Q15697 407 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 CSRP2Q16527 193 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 C2orf27AQ580R0 203 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 COLEC12Q5KU26 742 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 CREB3L3Q68CJ9 461 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 MYEOVQ96EZ4 313 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 FAM193BQ96PV7 902 aaPredicted RBP4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 SRPK1Q96SB4 655 aaKnown RBP4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 ELF4Q99607 663 aaPredicted RBP4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 LSM14BQ9BX40 385 aaKnown RBP4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 POFUT1Q9H488 388 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 EIF2B4Q9UI10 523 aaKnown RBP4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 SYNPO2Q9UMS6 1093 aa4.71□□□□□ -1.66
CBX3P1-201ENST00000325243 B4E1Z4 1266 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 E9PSI1 815 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 PLD2O14939 933 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 DNAJC8O75937 253 aaPredicted RBP4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 ALDH1A2O94788 518 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 FSBPO95073 299 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 ZNF37AP17032 561 aaPredicted RBP4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 APOBEC3AP31941 199 aaPredicted RBP4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 ZEB1P37275 1124 aaPredicted RBP4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 CASRP41180 1078 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 VPS72Q15906 364 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 ZKSCAN2Q63HK3 967 aa4.7□□□□□ -1.66
CBX3P1-201ENST00000325243 KIAA1841Q6NSI8 718 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms