RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 SLC16A4O15374 487 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 MAGEB2O15479 319 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 CALUO43852 315 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-202ENST00000324340 SERPINC1P01008 464 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 NAMPTP43490 491 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 SNRPFP62306 86 aaKnown RBP13.98□□□□□ -0.17
DDX39A-202ENST00000324340 GPS2Q13227 327 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 KCNJ12Q14500 433 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 PTPN14Q15678 1187 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 FAM114A1Q8IWE2 563 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 SLAIN1Q8ND83 568 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 ASAP3Q8TDY4 903 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 BEGAINQ9BUH8 593 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 XPO4Q9C0E2 1151 aaKnown RBP13.98□□□□□ -0.17
DDX39A-202ENST00000324340 L2HGDHQ9H9P8 463 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 WBP1LQ9NX94 342 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 CWC15Q9P013 229 aaKnown RBP13.98□□□□□ -0.17
DDX39A-202ENST00000324340 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.98□□□□□ -0.17
DDX39A-202ENST00000324340 IFNKQ9P0W0 207 aa13.98□□□□□ -0.17
DDX39A-202ENST00000324340 A0A1B0GTH6 734 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 CCDC169A6NNP5 214 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 CBFA2T2O43439 604 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 ADAMTS4O75173 837 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 RARBP10826 455 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 CAPN2P17655 700 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 CST5P28325 142 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-202ENST00000324340 CCND3P30281 292 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-202ENST00000324340 MARSP56192 900 aaKnown RBP13.97□□□□□ -0.17
DDX39A-202ENST00000324340 UBASH3AP57075 661 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 GSDMDP57764 484 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 PURAQ00577 322 aaKnown RBP13.97□□□□□ -0.17
DDX39A-202ENST00000324340 MYBPC2Q14324 1141 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 MXD4Q14582 209 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-202ENST00000324340 MFSD10Q14728 455 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 HSP90AA4PQ58FG1 418 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 FILIP1Q7Z7B0 1213 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 MAP4K3Q8IVH8 894 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 KSR1Q8IVT5 923 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 C12orf56Q8IXR9 622 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 RETREG2Q8NC44 543 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 GOLGA5Q8TBA6 731 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 TRAPPC12Q8WVT3 735 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 ACCSQ96QU6 501 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 KATNAL1Q9BW62 490 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 GBP3Q9H0R5 595 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 ARGLU1Q9NWB6 273 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-202ENST00000324340 GEMIN8Q9NWZ8 242 aaKnown RBP13.97□□□□□ -0.17
DDX39A-202ENST00000324340 FEZ2Q9UHY8 353 aaPredicted RBP13.97□□□□□ -0.17
DDX39A-202ENST00000324340 TBX20Q9UMR3 447 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 ADGRA3Q8IWK6 1321 aa13.97□□□□□ -0.17
DDX39A-202ENST00000324340 DENND3A2RUS2 1198 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 MYADML2A6NDP7 307 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 RRN3P2A6NIE6 340 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 ASAP2O43150 1006 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 GNA14O95837 355 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 CHRM1P11229 460 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-202ENST00000324340 RPL13P26373 211 aaKnown RBP13.96□□□□□ -0.17
DDX39A-202ENST00000324340 KLRC1P26715 233 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 CNGA1P29973 690 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 HOXC8P31273 242 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 BEX3Q00994 111 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 PPFIA1Q13136 1202 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 DRP2Q13474 957 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 CAPSQ13938 189 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 NR1I3Q14994 352 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 KRT31Q15323 416 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 GRIK4Q16099 956 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 KIAA0753Q2KHM9 967 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 MARCH8Q5T0T0 291 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 CDCA2Q69YH5 1023 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-202ENST00000324340 EFCAB12Q6NXP0 572 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 MTHFD1LQ6UB35 978 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 SLC9A9Q8IVB4 645 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 ANKRD20A12PQ8NF67 263 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 PRPF31Q8WWY3 499 aaKnown RBP13.96□□□□□ -0.17
DDX39A-202ENST00000324340 PSPC1Q8WXF1 523 aaKnown RBP13.96□□□□□ -0.17
DDX39A-202ENST00000324340 C16orf45Q96MC5 204 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-202ENST00000324340 TMEM134Q9H6X4 195 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 SPC25Q9HBM1 224 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 INTS13Q9NVM9 706 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 DMAC2Q9NW81 257 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 PSD3Q9NYI0 1048 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 MAGEC2Q9UBF1 373 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-202ENST00000324340 EXOC7Q9UPT5 735 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 NRCAMQ92823 1304 aa13.96□□□□□ -0.17
DDX39A-202ENST00000324340 MBLAC1A4D2B0 266 aaPredicted RBP13.96□□□□□ -0.18
DDX39A-202ENST00000324340 CCP110O43303 1012 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 NR3C1P04150 777 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 MYL3P08590 195 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 C6orf222P0C671 652 aaPredicted RBP13.96□□□□□ -0.18
DDX39A-202ENST00000324340 SMIM10L2AP0DMW4 78 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 SMIM10L2BP0DMW5 78 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 NR2F2P24468 414 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 PSEN2P49810 448 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 DNM2P50570 870 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 ADAM17P78536 824 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 POU5F1BQ06416 359 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 ADAM9Q13443 819 aa13.96□□□□□ -0.18
DDX39A-202ENST00000324340 CCSAPQ6IQ19 270 aaPredicted RBP13.96□□□□□ -0.18
DDX39A-202ENST00000324340 HS2ST1Q7LGA3 356 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms