RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 CHN1P15882 459 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 DNAJC24Q6P3W2 148 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 IRF2BP1Q8IU81 584 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 NIM1KQ8IY84 436 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 SCFD1Q8WVM8 642 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 GLG1Q92896 1179 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 BLOC1S4Q9NUP1 217 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.8■□□□□ 0.12
TCOF1-201ENST00000323668 LRRD1A4D1F6 860 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 PHF2O75151 1096 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 INHBAP08476 426 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 CASC4Q6P4E1 433 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 SP8Q8IXZ3 490 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 SLIT3O75094 1523 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 CFAP73A6NFT4 308 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 ZSCAN5CA6NGD5 496 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-201ENST00000323668 MAPK13O15264 365 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 SNX16P57768 344 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 YWHAGP61981 247 aaKnown RBP eCLIP15.79■□□□□ 0.12
TCOF1-201ENST00000323668 ZC2HC1CQ53FD0 456 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-201ENST00000323668 SLC7A3Q8WY07 619 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 SIK3Q9Y2K2 1263 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 NDUFB10O96000 172 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 QARSP47897 775 aaKnown RBP15.79■□□□□ 0.12
TCOF1-201ENST00000323668 SPARCL1Q14515 664 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 PRR5LQ6MZQ0 368 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 GJB7Q6PEY0 223 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 ACTRT1Q8TDG2 376 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 C1orf54Q8WWF1 131 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 TNFRSF25Q93038 417 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 COL5A2P05997 1499 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-201ENST00000323668 XRN1Q8IZH2 1706 aaKnown RBP15.79■□□□□ 0.12
TCOF1-201ENST00000323668 WTIPA6NIX2 430 aaPredicted RBP15.79■□□□□ 0.12
TCOF1-201ENST00000323668 MSH2P43246 934 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 ZBTB8OSQ8IWT0 167 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 SAYSD1Q9NPB0 183 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 TMEM51Q9NW97 253 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 AIPL1Q9NZN9 384 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 SCINQ9Y6U3 715 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 TNNC2P02585 160 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 CENPUQ71F23 418 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 HAUS6Q7Z4H7 955 aa15.79■□□□□ 0.12
TCOF1-201ENST00000323668 MED24O75448 989 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 ZNF571Q7Z3V5 609 aaPredicted RBP15.78■□□□□ 0.12
TCOF1-201ENST00000323668 SCYL3Q8IZE3 742 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 ATP2A3Q93084 1043 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 NCAPGQ9BPX3 1015 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 TMBIM4Q9HC24 238 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 CYP26A1O43174 497 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 MTMR1Q13613 665 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 MIGA2Q7L4E1 593 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 EPM2AIP1Q7L775 607 aaPredicted RBP15.78■□□□□ 0.12
TCOF1-201ENST00000323668 RPAINQ86UA6 219 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 RTFDC1Q9BY42 306 aaPredicted RBP15.78■□□□□ 0.12
TCOF1-201ENST00000323668 HAUS2Q9NVX0 235 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 ABCD1P33897 745 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 NR1H3Q13133 447 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 MTRQ99707 1265 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 TBC1D22BQ9NU19 505 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 CNTNAP4Q9C0A0 1308 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 NRXN3Q9Y4C0 1643 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 GOLGA8SH3BPF8 625 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 EIF3DO15371 548 aaKnown RBP eCLIP15.78■□□□□ 0.128e-7■□□□□ 8.1
TCOF1-201ENST00000323668 RPS6KA5O75582 802 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 MIIPQ5JXC2 388 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 ZNF449Q6P9G9 518 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 BCS1LQ9Y276 419 aa15.78■□□□□ 0.12
TCOF1-201ENST00000323668 P4HA1P13674 534 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 PEX19P40855 299 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 KRT81Q14533 505 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 TAF11Q15544 211 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 CDC42EP5Q6NZY7 148 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 SCYL2Q6P3W7 929 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 KCTD17Q8N5Z5 321 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 PRMT1Q99873 361 aaKnown RBP15.77■□□□□ 0.12
TCOF1-201ENST00000323668 NUDT12Q9BQG2 462 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 CPSF2Q9P2I0 782 aaKnown RBP15.77■□□□□ 0.12
TCOF1-201ENST00000323668 STK10O94804 968 aaKnown RBP15.77■□□□□ 0.12
TCOF1-201ENST00000323668 APBA3O96018 575 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 MT-ND3P03897 115 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 MYBL2P10244 700 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 HSPA9P38646 679 aaKnown RBP15.77■□□□□ 0.12
TCOF1-201ENST00000323668 DYNLT1P63172 113 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 THOC1Q96FV9 657 aaKnown RBP15.77■□□□□ 0.12
TCOF1-201ENST00000323668 SNF8Q96H20 258 aa15.77■□□□□ 0.12
TCOF1-201ENST00000323668 H7C0C1 242 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 TJP3O95049 919 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 ATP5OP48047 213 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 KRT17Q04695 432 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 SLC29A2Q14542 456 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 SDCCAG8Q86SQ7 713 aaPredicted RBP15.77■□□□□ 0.11
TCOF1-201ENST00000323668 TSEN2Q8NCE0 465 aaKnown RBP15.77■□□□□ 0.11
TCOF1-201ENST00000323668 PYROXD1Q8WU10 500 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 MASTLQ96GX5 879 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 TGS1Q96RS0 853 aaKnown RBP15.77■□□□□ 0.11
TCOF1-201ENST00000323668 C11orf70Q9BRQ4 267 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 NRBP2Q9NSY0 501 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 DENND3A2RUS2 1198 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 FAM153BP0C7A2 387 aa15.77■□□□□ 0.11
TCOF1-201ENST00000323668 FAM153CQ494X1 144 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms