RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 ZDHHC14Q8IZN3 488 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 ALG3Q92685 438 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 DCPSQ96C86 337 aaKnown RBP13.18□□□□□ -0.3
SEC24A-201ENST00000322887 LRRC45Q96CN5 670 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 CHMP6Q96FZ7 201 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 FAXDC2Q96IV6 333 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 GGA3Q9NZ52 723 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 ZBTB39O15060 712 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 KRT13P13646 458 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 GBP2P32456 591 aaPredicted RBP13.18□□□□□ -0.3
SEC24A-201ENST00000322887 ADCY7P51828 1080 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 GABPAQ06546 454 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 NAIF1Q69YI7 327 aaPredicted RBP13.18□□□□□ -0.3
SEC24A-201ENST00000322887 TAX1BP1Q86VP1 789 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 CCDC25Q86WR0 208 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 SPATS2Q86XZ4 545 aaKnown RBP13.18□□□□□ -0.3
SEC24A-201ENST00000322887 KCNV2Q8TDN2 545 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 FMO2Q99518 471 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 LBHD1Q9BQE6 289 aaPredicted RBP13.18□□□□□ -0.3
SEC24A-201ENST00000322887 ZNF287Q9HBT7 754 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 ACP6Q9NPH0 428 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 RNF14Q9UBS8 474 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 CTNNAL1Q9UBT7 734 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 STK38LQ9Y2H1 464 aa13.18□□□□□ -0.3
SEC24A-201ENST00000322887 TCP10L2B9ZVM9 353 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 ATMINO43313 823 aaPredicted RBP13.17□□□□□ -0.3
SEC24A-201ENST00000322887 FGFR1OPO95684 399 aaKnown RBP13.17□□□□□ -0.3
SEC24A-201ENST00000322887 CYP11B2P19099 503 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 KCNJ1P48048 391 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.35e-10■■■□□ 14.8
SEC24A-201ENST00000322887 CACNB3P54284 484 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 CUL1Q13616 776 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 ZKSCAN8Q15776 578 aaPredicted RBP13.17□□□□□ -0.3
SEC24A-201ENST00000322887 ZNF746Q6NUN9 644 aaPredicted RBP13.17□□□□□ -0.3
SEC24A-201ENST00000322887 LRIG3Q6UXM1 1119 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 SH3BP5LQ7L8J4 393 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 RPAINQ86UA6 219 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 LDHDQ86WU2 507 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 SFR1Q86XK3 245 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 ARFGAP2Q8N6H7 521 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 ACTRT1Q8TDG2 376 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 NSMCE1Q8WV22 266 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 SPIRE2Q8WWL2 714 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 KRT35Q92764 455 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 TEPSINQ96N21 525 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 PWWP2AQ96N64 755 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 DEFB129Q9H1M3 183 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 RRAGCQ9HB90 399 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
SEC24A-201ENST00000322887 STK17AQ9UEE5 414 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 SWAP70Q9UH65 585 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 HERC5Q9UII4 1024 aaKnown RBP13.17□□□□□ -0.3
SEC24A-201ENST00000322887 PCDHA12Q9UN75 941 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 CCT8L1PA6NM43 557 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 RASA3Q14644 834 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 EXOC3L4Q17RC7 722 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 ERMARDQ5T6L9 678 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 SLC35G2Q8TBE7 412 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 ATXN2LQ8WWM7 1075 aaKnown RBP13.17□□□□□ -0.3
SEC24A-201ENST00000322887 BTBD6Q96KE9 485 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 ZNF317Q96PQ6 595 aaPredicted RBP13.17□□□□□ -0.3
SEC24A-201ENST00000322887 SPZ1Q9BXG8 430 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 SIX2Q9NPC8 291 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 GCNT4Q9P109 453 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 COG5Q9UP83 839 aa13.17□□□□□ -0.3
SEC24A-201ENST00000322887 ASTN2O75129 1339 aaPredicted RBP13.16□□□□□ -0.3
SEC24A-201ENST00000322887 CCDC189A1A4V9 331 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 USP17L10C9JJH3 530 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 UBOX5O94941 541 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 PEX19P40855 299 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 RNASELQ05823 741 aaKnown RBP13.16□□□□□ -0.3
SEC24A-201ENST00000322887 ARHGAP44Q17R89 818 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 COBLL1Q53SF7 1204 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 TLDC1Q6P9B6 456 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 C16orf86Q6ZW13 317 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 ZFPM1Q8IX07 1006 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 RDH13Q8NBN7 331 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 OLIG1Q8TAK6 271 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 AGAP11Q8TF27 550 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 P2RX7Q99572 595 aaKnown RBP13.16□□□□□ -0.3
SEC24A-201ENST00000322887 FAM129AQ9BZQ8 928 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 RIC8AQ9NPQ8 531 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 STXBP5LQ9Y2K9 1186 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 C5orf60A6NFR6 353 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 DDTLA6NHG4 134 aaPredicted RBP13.16□□□□□ -0.3
SEC24A-201ENST00000322887 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 GH1P01241 217 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 TRIM49P0CI25 452 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 TRIM49CP0CI26 452 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 POU5F1Q01860 360 aaKnown RBP13.16□□□□□ -0.3
SEC24A-201ENST00000322887 XRCC4Q13426 336 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 ZC2HC1CQ53FD0 456 aaPredicted RBP13.16□□□□□ -0.3
SEC24A-201ENST00000322887 RUFY4Q6ZNE9 571 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 SULF1Q8IWU6 871 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 GDAP1Q8TB36 358 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 DDX23Q9BUQ8 820 aaKnown RBP13.16□□□□□ -0.3
SEC24A-201ENST00000322887 THAP2Q9H0W7 228 aa13.16□□□□□ -0.3
SEC24A-201ENST00000322887 SERPINB13Q9UIV8 391 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms