RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 TRIM49CP0CI26 452 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 FERP16591 822 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 UBA1P22314 1058 aaKnown RBP18.51■□□□□ 0.55
SSR4-201ENST00000320857 PRKCIP41743 596 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 STAT1P42224 750 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 VAMP7P51809 220 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 CHMP4BP1P59074 171 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 Q3C1V9 767 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 MTERF2Q49AM1 385 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 C10orf76Q5T2E6 689 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 PAPD7Q5XG87 772 aaKnown RBP18.51■□□□□ 0.55
SSR4-201ENST00000320857 IQCEQ6IPM2 695 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 RSRC2Q7L4I2 434 aaKnown RBP18.51■□□□□ 0.55
SSR4-201ENST00000320857 IRF2BP2Q7Z5L9 587 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 ALS2CR12Q96Q35 445 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.51■□□□□ 0.55
SSR4-201ENST00000320857 INTS2Q9H0H0 1204 aaKnown RBP18.51■□□□□ 0.55
SSR4-201ENST00000320857 DUSP10Q9Y6W6 482 aa18.51■□□□□ 0.55
SSR4-201ENST00000320857 TISP43B9A030 160 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 SCP2P22307 547 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 RFX1P22670 979 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 KCTD2Q14681 263 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 FAM160B1Q5W0V3 765 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 KCNV1Q6PIU1 500 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 TRAPPC11Q7Z392 1133 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 VPS36Q86VN1 386 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 RNF10Q8N5U6 811 aaKnown RBP18.5■□□□□ 0.55
SSR4-201ENST00000320857 BSNDQ8WZ55 320 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 RABGGTAQ92696 567 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 POLR3FQ9H1D9 316 aaPredicted RBP18.5■□□□□ 0.55
SSR4-201ENST00000320857 MROH8Q9H579 483 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 XPNPEP1Q9NQW7 623 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 SLC45A1Q9Y2W3 748 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 IGKV6D-21A0A0A0MT36 114 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 FARP2O94887 1054 aaPredicted RBP18.5■□□□□ 0.55
SSR4-201ENST00000320857 CETPP11597 493 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 POLGP54098 1239 aaPredicted RBP18.5■□□□□ 0.55
SSR4-201ENST00000320857 EMC2Q15006 297 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 CBWD6Q4V339 395 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 CBWD3Q5JTY5 395 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 CBWD5Q5RIA9 395 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 TEX35Q5T0J7 233 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 GPR161Q8N6U8 529 aaKnown RBP18.5■□□□□ 0.55
SSR4-201ENST00000320857 SHCBP1Q8NEM2 672 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 VTI1AQ96AJ9 217 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 MMP19Q99542 508 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 STK33Q9BYT3 514 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 SAR1BQ9Y6B6 198 aa18.5■□□□□ 0.55
SSR4-201ENST00000320857 DOCK5Q9H7D0 1870 aa18.49■□□□□ 0.55
SSR4-201ENST00000320857 ATP1A1P05023 1023 aaKnown RBP18.49■□□□□ 0.55
SSR4-201ENST00000320857 CCDC172P0C7W6 258 aa18.49■□□□□ 0.55
SSR4-201ENST00000320857 GTF2A2P52657 109 aa18.49■□□□□ 0.55
SSR4-201ENST00000320857 ENOX2Q16206 610 aaKnown RBP18.49■□□□□ 0.55
SSR4-201ENST00000320857 MS4A4AQ96JQ5 239 aa18.49■□□□□ 0.55
SSR4-201ENST00000320857 KIFC3Q9BVG8 833 aa18.49■□□□□ 0.55
SSR4-201ENST00000320857 NIFKQ9BYG3 293 aaKnown RBP18.49■□□□□ 0.55
SSR4-201ENST00000320857 R3HDMLQ9H3Y0 253 aa18.49■□□□□ 0.55
SSR4-201ENST00000320857 NRBP2Q9NSY0 501 aa18.49■□□□□ 0.55
SSR4-201ENST00000320857 ARGLU1Q9NWB6 273 aaPredicted RBP18.49■□□□□ 0.55
SSR4-201ENST00000320857 DNAJC12Q9UKB3 198 aa18.49■□□□□ 0.55
SSR4-201ENST00000320857 ABT1Q9ULW3 272 aaKnown RBP18.49■□□□□ 0.55
SSR4-201ENST00000320857 JRKLQ9Y4A0 524 aa18.49■□□□□ 0.55
SSR4-201ENST00000320857 EMSYQ7Z589 1322 aa18.49■□□□□ 0.55
SSR4-201ENST00000320857 GSTTP1A0A1W2PQM5 241 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 CTAGE15A4D2H0 777 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 TMEM88BA6NKF7 163 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 PMM2O15305 246 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 CTAGE8P0CG41 777 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 CNGA1P29973 690 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 MCCD1P59942 119 aaPredicted RBP18.48■□□□□ 0.55
SSR4-201ENST00000320857 ERVK-9P63128 1117 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 PTK2Q05397 1052 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 FBXO38Q6PIJ6 1188 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 METTL7BQ6UX53 244 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 CTAGE6Q86UF2 777 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 CTAGE4Q8IX94 777 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 NOX5Q96PH1 765 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 MLXIPQ9HAP2 919 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 APEX2Q9UBZ4 518 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 ADAMTS1Q9UHI8 967 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 PUF60Q9UHX1 559 aaKnown RBP18.48■□□□□ 0.55
SSR4-201ENST00000320857 AJAP1Q9UKB5 411 aaPredicted RBP18.48■□□□□ 0.55
SSR4-201ENST00000320857 LRRC37A2A6NM11 1700 aa18.48■□□□□ 0.55
SSR4-201ENST00000320857 ARID2Q68CP9 1835 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 DNAJC25-GNG10A0A024R161 153 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 A0A087X0T9 212 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 LOC102724159A0A0B4J2E5 919 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 ANKRD63C9JTQ0 380 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 ENC1O14682 589 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 GFPT2O94808 682 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 MOCS3O95396 460 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 FAM228BP0C875 321 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 H2AFXP16104 143 aaPredicted RBP18.47■□□□□ 0.55
SSR4-201ENST00000320857 ATP4AP20648 1035 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 SOX5P35711 763 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 RFC5P40937 340 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 SOX10P56693 466 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 HTRA3P83110 453 aa18.47■□□□□ 0.55
SSR4-201ENST00000320857 PWP2Q15269 919 aaKnown RBP18.47■□□□□ 0.55
SSR4-201ENST00000320857 BRDTQ58F21 947 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms