RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 TMEM143Q96AN5 459 aa17.39■□□□□ 0.37
FOXR1-201ENST00000317011 EIF2AK1Q9BQI3 630 aaKnown RBP17.39■□□□□ 0.37
FOXR1-201ENST00000317011 MINDY3Q9H8M7 445 aa17.39■□□□□ 0.37
FOXR1-201ENST00000317011 BRMS1Q9HCU9 246 aa17.39■□□□□ 0.37
FOXR1-201ENST00000317011 FAM105AQ9NUU6 356 aa17.39■□□□□ 0.37
FOXR1-201ENST00000317011 C5orf42Q9H799 3197 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 CSPG5O95196 566 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 XRCC6P12956 609 aaKnown RBP eCLIP17.38■□□□□ 0.37
FOXR1-201ENST00000317011 NDUFV1P49821 464 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 KRT17Q04695 432 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 LAMTOR4Q0VGL1 99 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 FERMT3Q86UX7 667 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 IFNLR1Q8IU57 520 aaPredicted RBP17.38■□□□□ 0.37
FOXR1-201ENST00000317011 MRPL43Q8N983 215 aaKnown RBP17.38■□□□□ 0.37
FOXR1-201ENST00000317011 TCP11Q8WWU5 503 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 PSPC1Q8WXF1 523 aaKnown RBP17.38■□□□□ 0.37
FOXR1-201ENST00000317011 SUSD6Q92537 303 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 MRPL9Q9BYD2 267 aaKnown RBP17.38■□□□□ 0.37
FOXR1-201ENST00000317011 S1PR5Q9H228 398 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 XPNPEP1Q9NQW7 623 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 ANKEF1Q9NU02 776 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 AGPAT5Q9NUQ2 364 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 LIMCH1Q9UPQ0 1083 aa17.38■□□□□ 0.37
FOXR1-201ENST00000317011 MEIS3P2A8K0S8 358 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 HIDE1A8MVS5 230 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 MARCH6O60337 910 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 PBX3P40426 434 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 RAB27AP51159 221 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 POLGP54098 1239 aaPredicted RBP17.37■□□□□ 0.37
FOXR1-201ENST00000317011 BCAR1P56945 870 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 CBX2Q14781 532 aaPredicted RBP17.37■□□□□ 0.37
FOXR1-201ENST00000317011 PCBP1Q15365 356 aaKnown RBP eCLIP17.37■□□□□ 0.37
FOXR1-201ENST00000317011 UBXN11Q5T124 520 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 TWF2Q6IBS0 349 aaKnown RBP17.37■□□□□ 0.37
FOXR1-201ENST00000317011 NCAPH2Q6IBW4 605 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 CATSPER4Q7RTX7 472 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 TPH2Q8IWU9 490 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 RNF169Q8NCN4 708 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 NLRP4Q96MN2 994 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 KIF2CQ99661 725 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 LLPHQ9BRT6 129 aaKnown RBP17.37■□□□□ 0.37
FOXR1-201ENST00000317011 TTC12Q9H892 705 aaPredicted RBP17.37■□□□□ 0.37
FOXR1-201ENST00000317011 BARX2Q9UMQ3 279 aaPredicted RBP17.37■□□□□ 0.37
FOXR1-201ENST00000317011 PIN4Q9Y237 131 aaKnown RBP17.37■□□□□ 0.37
FOXR1-201ENST00000317011 PLXNA4Q9HCM2 1894 aa17.37■□□□□ 0.37
FOXR1-201ENST00000317011 CARNS1A5YM72 827 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 PRR33A8MZF0 331 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 LOC730098B7Z3J9 87 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 DCXO43602 365 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 SRGAP2CP0DJJ0 459 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 ARL2P36404 184 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 ALDH7A1P49419 539 aaKnown RBP17.36■□□□□ 0.37
FOXR1-201ENST00000317011 PTENP60484 403 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 RBM10P98175 930 aaKnown RBP17.36■□□□□ 0.37
FOXR1-201ENST00000317011 EMC2Q15006 297 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 CALCRLQ16602 461 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 XKR9Q5GH70 373 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 AGMOQ6ZNB7 445 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 LPPQ93052 612 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 POP1Q99575 1024 aaKnown RBP17.36■□□□□ 0.37
FOXR1-201ENST00000317011 TCF25Q9BQ70 676 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 NRDE2Q9H7Z3 1164 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 PCDHB2Q9Y5E7 798 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 IRAK3Q9Y616 596 aa17.36■□□□□ 0.37
FOXR1-201ENST00000317011 C2orf71A6NGG8 1288 aa17.35■□□□□ 0.37
FOXR1-201ENST00000317011 GALTP07902 379 aa17.35■□□□□ 0.37
FOXR1-201ENST00000317011 SPATA31C1P0DKV0 1188 aa17.35■□□□□ 0.37
FOXR1-201ENST00000317011 CYP4A11Q02928 519 aa17.35■□□□□ 0.37
FOXR1-201ENST00000317011 MXD4Q14582 209 aaPredicted RBP17.35■□□□□ 0.37
FOXR1-201ENST00000317011 HERC4Q5GLZ8 1057 aaPredicted RBP17.35■□□□□ 0.37
FOXR1-201ENST00000317011 NOMO2Q5JPE7 1267 aa17.35■□□□□ 0.37
FOXR1-201ENST00000317011 SYCE2Q6PIF2 218 aa17.35■□□□□ 0.37
FOXR1-201ENST00000317011 TMEM60Q9H2L4 133 aa17.35■□□□□ 0.37
FOXR1-201ENST00000317011 UPF2Q9HAU5 1272 aaKnown RBP17.35■□□□□ 0.37
FOXR1-201ENST00000317011 TBC1D13Q9NVG8 400 aa17.35■□□□□ 0.37
FOXR1-201ENST00000317011 USP15Q9Y4E8 981 aaPredicted RBP17.35■□□□□ 0.37
FOXR1-201ENST00000317011 INPPL1O15357 1258 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 NEMFO60524 1076 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 DGAT1O75907 488 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 TXKP42681 527 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 RARRES1P49788 294 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 PLPP4Q5VZY2 271 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 ANKRD54Q6NXT1 300 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 GLB1LQ6UWU2 654 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 TMC7Q7Z402 723 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 DDX53Q86TM3 631 aaKnown RBP17.34■□□□□ 0.37
FOXR1-201ENST00000317011 RNF135Q8IUD6 432 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 RNF149Q8NC42 400 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 PGBD4Q96DM1 585 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 IGSF21Q96ID5 467 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 MTRQ99707 1265 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 PHF7Q9BWX1 381 aaPredicted RBP17.34■□□□□ 0.37
FOXR1-201ENST00000317011 NFKBIZQ9BYH8 718 aa17.34■□□□□ 0.37
FOXR1-201ENST00000317011 FAM86C2PA6NEL3 165 aa17.33■□□□□ 0.36
FOXR1-201ENST00000317011 NT5C1B-RDH14C9J2C7 533 aa17.33■□□□□ 0.36
FOXR1-201ENST00000317011 HOXB8P17481 243 aaPredicted RBP17.33■□□□□ 0.36
FOXR1-201ENST00000317011 NCLP19338 710 aaKnown RBP17.33■□□□□ 0.36
FOXR1-201ENST00000317011 AXLP30530 894 aa17.33■□□□□ 0.36
FOXR1-201ENST00000317011 AFF1P51825 1210 aaKnown RBP17.33■□□□□ 0.36
FOXR1-201ENST00000317011 TRIM29Q14134 588 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms