RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 FAM167AQ96KS9 214 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 IKZF4Q9H2S9 585 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 NCANO14594 1321 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 SFI1A8K8P3 1242 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 ZC3H11AO75152 810 aaKnown RBP eCLIP7.84□□□□□ -1.15
NPHP1-201ENST00000316534 SSBP05455 408 aaKnown RBP eCLIP7.84□□□□□ -1.15
NPHP1-201ENST00000316534 KIF11P52732 1056 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 NPEPPSP55786 919 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 ARHGAP1Q07960 439 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 PLA2G4FQ68DD2 849 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 GADL1Q6ZQY3 521 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 SLFN11Q7Z7L1 901 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 BBXQ8WY36 941 aaPredicted RBP7.84□□□□□ -1.15
NPHP1-201ENST00000316534 JAKMIP2Q96AA8 810 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 LSM14BQ9BX40 385 aaKnown RBP7.84□□□□□ -1.15
NPHP1-201ENST00000316534 HAPLN2Q9GZV7 340 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 PTPRHQ9HD43 1115 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 HSPBP1Q9NZL4 362 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 EXOC7Q9UPT5 735 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 PCDHGC5Q9Y5F6 944 aa7.84□□□□□ -1.15
NPHP1-201ENST00000316534 ASB14A6NK59 587 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 EFCAB8A8MWE9 144 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 BTBD19C9JJ37 291 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 ANKRD63C9JTQ0 380 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 POTEB2H3BUK9 544 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 HOXC6P09630 235 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 SLC9A1P19634 815 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 GLRA2P23416 452 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 RAD51AP2Q09MP3 1159 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 HSP90AA2PQ14568 343 aaPredicted RBP7.84□□□□□ -1.16
NPHP1-201ENST00000316534 SWSAP1Q6NVH7 229 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 CRELD2Q6UXH1 353 aaPredicted RBP7.84□□□□□ -1.16
NPHP1-201ENST00000316534 XXYLT1Q8NBI6 393 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 SMCR8Q8TEV9 937 aaPredicted RBP7.84□□□□□ -1.16
NPHP1-201ENST00000316534 FAXDC2Q96IV6 333 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 MMP19Q99542 508 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 PCDHA13Q9Y5I0 950 aa7.84□□□□□ -1.16
NPHP1-201ENST00000316534 TMEM150BA6NC51 233 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 F8VZ95 297 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 K7ENM7 598 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 PLEKP08567 350 aaPredicted RBP7.83□□□□□ -1.16
NPHP1-201ENST00000316534 HOXC8P31273 242 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 EMC2Q15006 297 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 EXOC3L4Q17RC7 722 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 IQCEQ6IPM2 695 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 ANKRD35Q8N283 1001 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 SEPT1Q8WYJ6 367 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 MPHOSPH6Q99547 160 aaKnown RBP7.83□□□□□ -1.16
NPHP1-201ENST00000316534 PTPN18Q99952 460 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 LACRTQ9GZZ8 138 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 KIAA1586Q9HCI6 787 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 DDX39AO00148 427 aaKnown RBP7.83□□□□□ -1.16
NPHP1-201ENST00000316534 EDN1P05305 212 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 FAM193AP78312 1265 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 IRX3P78415 501 aaPredicted RBP7.83□□□□□ -1.16
NPHP1-201ENST00000316534 PSMD6Q15008 389 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 NAB2Q15742 525 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 SFMBT2Q5VUG0 894 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 CST9Q5W186 159 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 ZPBP2Q6X784 338 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 ILDR2Q71H61 639 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 MSANTD4Q8NCY6 345 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 PSPC1Q8WXF1 523 aaKnown RBP7.83□□□□□ -1.16
NPHP1-201ENST00000316534 DHX38Q92620 1227 aaKnown RBP7.83□□□□□ -1.16
NPHP1-201ENST00000316534 APEX2Q9UBZ4 518 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 CNTNAP2Q9UHC6 1331 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 MTA2O94776 668 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 EIF4A3P38919 411 aaKnown RBP7.83□□□□□ -1.16
NPHP1-201ENST00000316534 PPP3CAQ08209 521 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 FAM110CQ1W6H9 321 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 XKR9Q5GH70 373 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 FAM160B1Q5W0V3 765 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 HS2ST1Q7LGA3 356 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 ASAP3Q8TDY4 903 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 PARD3BQ8TEW8 1205 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 ATP8B4Q8TF62 1192 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 CPLX3Q8WVH0 158 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 RUBCNQ92622 972 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 CBWD1Q9BRT8 395 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 GPRC5CQ9NQ84 441 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 CDC23Q9UJX2 597 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 STXBP5LQ9Y2K9 1186 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 FHOD1Q9Y613 1164 aa7.83□□□□□ -1.16
NPHP1-201ENST00000316534 USO1O60763 962 aaKnown RBP7.82□□□□□ -1.16
NPHP1-201ENST00000316534 POTEJP0CG39 1038 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 CASQ1P31415 396 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 VAMP7P51809 220 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 CYP24A1Q07973 514 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 DMP1Q13316 513 aaPredicted RBP7.82□□□□□ -1.16
NPHP1-201ENST00000316534 PLCB4Q15147 1175 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 WHAMMP3Q1A5X7 153 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 CYFIP1Q7L576 1253 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 ZNF571Q7Z3V5 609 aaPredicted RBP7.82□□□□□ -1.16
NPHP1-201ENST00000316534 KSR1Q8IVT5 923 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 GPRC5AQ8NFJ5 357 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 PPTC7Q8NI37 304 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 HHIPL1Q96JK4 782 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 INTS2Q9H0H0 1204 aaKnown RBP7.82□□□□□ -1.16
NPHP1-201ENST00000316534 ABCB6Q9NP58 842 aa7.82□□□□□ -1.16
NPHP1-201ENST00000316534 A0A0B4J269 797 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms