RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PABPC4Q13310 644 aaKnown RBP eCLIP18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 CTTNQ14247 550 aaKnown RBP18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 CEP55Q53EZ4 464 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 SULF1Q8IWU6 871 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 C3orf20Q8ND61 904 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 RAPGEF5Q92565 580 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 SYN2Q92777 582 aaPredicted RBP18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 FGFBP2Q9BYJ0 223 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 WDR11Q9BZH6 1224 aa18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 TPX2Q9ULW0 747 aaKnown RBP18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.64■□□□□ 0.57
SCAMP4-201ENST00000316097 DCDC2CA8MYV0 355 aa18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 TRAF5O00463 557 aa18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 PLA2G4BP0C869 781 aa18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 ITGB5P18084 799 aa18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 EIF2AK2P19525 551 aaKnown RBP18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 FLT3P36888 993 aa18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 SCTRP47872 440 aa18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 HSD17B4P51659 736 aa18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 ZBED4O75132 1171 aa18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 BYSLQ13895 437 aaKnown RBP18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 E2F5Q15329 346 aa18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 DDX47Q9H0S4 455 aaKnown RBP18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 AFG3L2Q9Y4W6 797 aa18.63■□□□□ 0.57
SCAMP4-201ENST00000316097 SART1O43290 800 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 KIF4AO95239 1232 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 MAGOHP61326 146 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 LRCH2Q5VUJ6 765 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 OTOP1Q7RTM1 612 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 EIF1ADQ8N9N8 165 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 SYTL5Q8TDW5 730 aaPredicted RBP18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 PIGOQ8TEQ8 1089 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 MAGOHBQ96A72 148 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 DNAJC19Q96DA6 116 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 CLMNQ96JQ2 1002 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 FAM20AQ96MK3 541 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 ZHX3Q9H4I2 956 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 SNCAIPQ9Y6H5 919 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 TBX3O15119 743 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 PLS1Q14651 629 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 DNAAF5Q86Y56 855 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 BANK1Q8NDB2 785 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 SCFD2Q8WU76 684 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 EIF2AK1Q9BQI3 630 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 ZNF577Q9BSK1 485 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 GINM1Q9NU53 330 aa18.62■□□□□ 0.57
SCAMP4-201ENST00000316097 FKBP3Q00688 224 aaKnown RBP18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 ASIC2Q16515 512 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 ARSHQ5FYA8 562 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 TREML2Q5T2D2 321 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 ILDR2Q71H61 639 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 TRMT1LQ7Z2T5 733 aaKnown RBP18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 CPLX4Q7Z7G2 160 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 GPBP1Q86WP2 473 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 TPH2Q8IWU9 490 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 MYOCDQ8IZQ8 938 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 C5orf60A6NFR6 353 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 MYCLP12524 364 aaPredicted RBP18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 TMEM132BQ14DG7 1078 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 GPR162Q16538 588 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 KRT71Q3SY84 523 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 EAPPQ56P03 285 aaPredicted RBP18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 HYIQ5T013 277 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 AGBL2Q5U5Z8 902 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 GKAP1Q5VSY0 366 aaPredicted RBP18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 SNRNP48Q6IEG0 339 aaKnown RBP18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 CCDC50Q8IVM0 306 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 TATDN2Q93075 761 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 NT5C3AQ9H0P0 336 aa18.61■□□□□ 0.57
SCAMP4-201ENST00000316097 DAPK3O43293 454 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 PSMD10O75832 226 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 MRPS9P82933 396 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 FAM212AQ96EL1 285 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 ELP3Q9H9T3 547 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 EZRP15311 586 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 CYP11B2P19099 503 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 RPA1P27694 616 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 MTMR3Q13615 1198 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 BAATQ14032 418 aaPredicted RBP18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 EP400NLQ6ZTU2 488 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 DYDC2Q96IM9 177 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 PBKQ96KB5 322 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 PANK4Q9NVE7 773 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 AMACRQ9UHK6 382 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 NOC2LQ9Y3T9 749 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 PPP2R3BQ9Y5P8 575 aa18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 DICER1Q9UPY3 1922 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-201ENST00000316097 KDM3AQ9Y4C1 1321 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 TMCO5BA8MYB1 307 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 PGRMC1O00264 195 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 CES2O00748 559 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 GAS7O60861 476 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 PAEPP09466 180 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 COG2Q14746 738 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 ZCWPW2Q504Y3 356 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 DPY19L2Q6NUT2 758 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 RNF207Q6ZRF8 634 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 ACTRT1Q8TDG2 376 aa18.59■□□□□ 0.57
SCAMP4-201ENST00000316097 MIEF2Q96C03 454 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms