RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 PARVGQ9HBI0 331 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 MLXIPLQ9NP71 852 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 TMEM59LQ9UK28 342 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 SUGT1Q9Y2Z0 365 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 F8VZ95 297 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 GAS7O60861 476 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 MMEP08473 750 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 FGFR4P22455 802 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 VPS41P49754 854 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 ADCY1Q08828 1119 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 HYIQ5T013 277 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 RINT1Q6NUQ1 792 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 PRPF38AQ8NAV1 312 aaKnown RBP16.09■□□□□ 0.17
TFE3-201ENST00000315869 NEK9Q8TD19 979 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 CCDC172P0C7W6 258 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 KCNJ1P48048 391 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 CBWD6Q4V339 395 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 CBWD3Q5JTY5 395 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 CBWD5Q5RIA9 395 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 C18orf8Q96DM3 657 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 TBC1D31Q96DN5 1066 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 MYCBPQ99417 103 aaPredicted RBP16.09■□□□□ 0.17
TFE3-201ENST00000315869 ERVK-5Q9HDB9 667 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 NSMFQ6X4W1 530 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 PHLDB2Q86SQ0 1253 aa16.09■□□□□ 0.17
TFE3-201ENST00000315869 NAP1L3Q99457 506 aaPredicted RBP16.09■□□□□ 0.17
TFE3-201ENST00000315869 ELAC2Q9BQ52 826 aaKnown RBP16.09■□□□□ 0.17
TFE3-201ENST00000315869 INTS2Q9H0H0 1204 aaKnown RBP16.09■□□□□ 0.17
TFE3-201ENST00000315869 FOXN3O00409 490 aaPredicted RBP16.08■□□□□ 0.16
TFE3-201ENST00000315869 TRAPPC3O43617 180 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 FSBPO95073 299 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 FTLP02792 175 aaPredicted RBP16.08■□□□□ 0.16
TFE3-201ENST00000315869 CHN1P15882 459 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 HOXA7P31268 230 aaPredicted RBP16.08■□□□□ 0.16
TFE3-201ENST00000315869 SLC29A2Q14542 456 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 FAM133BQ5BKY9 247 aaKnown RBP16.08■□□□□ 0.16
TFE3-201ENST00000315869 SLC20A1Q8WUM9 679 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 ELMO3Q96BJ8 720 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 CCDC17Q96LX7 622 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 VCPKMTQ9H867 229 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 INTS9Q9NV88 658 aaKnown RBP16.08■□□□□ 0.16
TFE3-201ENST00000315869 TMOD2Q9NZR1 351 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 DLEC1Q9Y238 1755 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 GCLMP48507 274 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 PMS2P54278 862 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 CXCL9Q07325 125 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 SNX1Q13596 522 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 CC2D2BQ6DHV5 1058 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 HIBCHQ6NVY1 386 aaPredicted RBP16.08■□□□□ 0.16
TFE3-201ENST00000315869 RSBN1LQ6PCB5 846 aaPredicted RBP16.08■□□□□ 0.16
TFE3-201ENST00000315869 KCNK9Q9NPC2 374 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 SIX2Q9NPC8 291 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 MTRF1LQ9UGC7 380 aaKnown RBP16.08■□□□□ 0.16
TFE3-201ENST00000315869 ALG6Q9Y672 507 aa16.08■□□□□ 0.16
TFE3-201ENST00000315869 IGKV6D-41A0A0C4DH26 115 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 ARHGEF35A5YM69 484 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 TGFB1I1O43294 461 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 NDUFB10O96000 172 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 PRKCIP41743 596 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 MARCKSL1P49006 195 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 AP3B2Q13367 1082 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 LTBP1Q14766 1721 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 LRRC14Q15048 493 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 SPRED3Q2MJR0 410 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 KIAA1755Q5JYT7 1200 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 SYDE2Q5VT97 1194 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 CHADLQ6NUI6 762 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 JAMLQ86YT9 394 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 NIM1KQ8IY84 436 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 ANKS4BQ8N8V4 417 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 ANKRD42Q8N9B4 389 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 ETNPPLQ8TBG4 499 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 TCP11Q8WWU5 503 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 HVCN1Q96D96 273 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 NCAPGQ9BPX3 1015 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 ERP44Q9BS26 406 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 H0YGN5 161 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 EYA4O95677 639 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 CLTAP09496 248 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 FNTAP49354 379 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 ZFYVE27Q5T4F4 411 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 SEL1L2Q5TEA6 688 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 STXBP4Q6ZWJ1 553 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 SAMD7Q7Z3H4 446 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 UBL4BQ8N7F7 174 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 ALG3Q92685 438 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 BTBD6Q96KE9 485 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 STK33Q9BYT3 514 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 ACP6Q9NPH0 428 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 SAMD15Q9P1V8 674 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 SLC12A6Q9UHW9 1150 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 NFS1Q9Y697 457 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 TISP43B9A030 160 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 K7ENM7 598 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 IFI35P80217 286 aaPredicted RBP16.07■□□□□ 0.16
TFE3-201ENST00000315869 CETN1Q12798 172 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 TRIP13Q15645 432 aaPredicted RBP16.07■□□□□ 0.16
TFE3-201ENST00000315869 PPM1KQ8N3J5 372 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 CCDC197Q8NCU1 140 aa16.07■□□□□ 0.16
TFE3-201ENST00000315869 BANK1Q8NDB2 785 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms