RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ARL8AQ96BM9 186 aa12.52□□□□□ -0.4
PTPN2-201ENST00000309660 ARHGEF26Q96DR7 871 aa12.52□□□□□ -0.4
PTPN2-201ENST00000309660 DPH5Q9H2P9 285 aa12.52□□□□□ -0.4
PTPN2-201ENST00000309660 CTTNBP2NLQ9P2B4 639 aa12.52□□□□□ -0.4
PTPN2-201ENST00000309660 USP20Q9Y2K6 914 aa12.52□□□□□ -0.4
PTPN2-201ENST00000309660 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.41
PTPN2-201ENST00000309660 GTPBP10A4D1E9 387 aaKnown RBP12.52□□□□□ -0.41
PTPN2-201ENST00000309660 DLATP10515 647 aaKnown RBP12.52□□□□□ -0.41
PTPN2-201ENST00000309660 BCRP11274 1271 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 PGM5Q15124 567 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 ZNF572Q7Z3I7 529 aaPredicted RBP12.52□□□□□ -0.41
PTPN2-201ENST00000309660 CBWD2Q8IUF1 395 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 MICALL2Q8IY33 904 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 XXYLT1Q8NBI6 393 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 ZIM3Q96PE6 472 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 CELF4Q9BZC1 486 aaKnown RBP12.52□□□□□ -0.41
PTPN2-201ENST00000309660 DEFB129Q9H1M3 183 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 RNF146Q9NTX7 359 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 SART1O43290 800 aaKnown RBP12.52□□□□□ -0.41
PTPN2-201ENST00000309660 ATMINO43313 823 aaPredicted RBP12.52□□□□□ -0.41
PTPN2-201ENST00000309660 FGGP02679 453 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 PLS3P13797 630 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 MXI1P50539 228 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 TNFAIP1Q13829 316 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 NLRX1Q86UT6 975 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 LRRC57Q8N9N7 239 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 TMEM206Q9H813 350 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 SLC38A10Q9HBR0 1119 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 TMOD4Q9NZQ9 345 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 KCND2Q9NZV8 630 aa12.52□□□□□ -0.41
PTPN2-201ENST00000309660 PHF20L1A8MW92 1017 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 CCDC172P0C7W6 258 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 HMGCS2P54868 508 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 PPP2R5AQ15172 486 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 FKBP1CQ5VVH2 108 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 POTEAQ6S8J7 498 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 INTS8Q75QN2 995 aaKnown RBP12.51□□□□□ -0.41
PTPN2-201ENST00000309660 BICD1Q96G01 975 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 CEP170P1Q96L14 293 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 DMAC2Q9NW81 257 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 CWC15Q9P013 229 aaKnown RBP12.51□□□□□ -0.41
PTPN2-201ENST00000309660 PPP1R9AQ9ULJ8 1098 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 CCNE2O96020 404 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 GLE1Q53GS7 698 aaKnown RBP12.51□□□□□ -0.41
PTPN2-201ENST00000309660 PCNX4Q63HM2 1172 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 SNRNP48Q6IEG0 339 aaKnown RBP12.51□□□□□ -0.41
PTPN2-201ENST00000309660 MSL3Q8N5Y2 521 aaKnown RBP12.51□□□□□ -0.41
PTPN2-201ENST00000309660 LPAR1Q92633 364 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 WRNIP1Q96S55 665 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 PDCD2LQ9BRP1 358 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 HACL1Q9UJ83 578 aa12.51□□□□□ -0.41
PTPN2-201ENST00000309660 OPA1O60313 960 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 B3GNT9Q6UX72 402 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 SYCE1Q8N0S2 351 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 KCTD17Q8N5Z5 321 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 NEK9Q8TD19 979 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 PBKQ96KB5 322 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPN2-201ENST00000309660 TOPORSQ9NS56 1045 aaPredicted RBP12.5□□□□□ -0.41
PTPN2-201ENST00000309660 PSD3Q9NYI0 1048 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 GABBR1Q9UBS5 961 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 TELO2Q9Y4R8 837 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 UBIAD1Q9Y5Z9 338 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 DENND3A2RUS2 1198 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 FTLP02792 175 aaPredicted RBP12.5□□□□□ -0.41
PTPN2-201ENST00000309660 GMPSP49915 693 aaPredicted RBP12.5□□□□□ -0.41
PTPN2-201ENST00000309660 ERVK-9P63128 1117 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 PDE4CQ08493 712 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 DALRD3Q5D0E6 543 aaKnown RBP12.5□□□□□ -0.41
PTPN2-201ENST00000309660 NT5DC3Q86UY8 548 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 RPUSD2Q8IZ73 545 aaKnown RBP12.5□□□□□ -0.41
PTPN2-201ENST00000309660 RFFLQ8WZ73 363 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 KIAA1683Q9H0B3 1180 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 TBC1D22BQ9NU19 505 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 BCCIPQ9P287 314 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPN2-201ENST00000309660 FBXL5Q9UKA1 691 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 WDR64B1ANS9 1081 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 TTI1O43156 1089 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 ZEB2O60315 1214 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 PLA2G6O60733 806 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 CALCAP01258 141 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 PSMC5P62195 406 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 MESDQ14696 234 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 AADACL2Q6P093 401 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 PHLDB2Q86SQ0 1253 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 OR2W6PQ8NHA6 318 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 GPR88Q9GZN0 384 aa12.5□□□□□ -0.41
PTPN2-201ENST00000309660 COL2A1P02458 1487 aaPredicted RBP12.5□□□□□ -0.41
PTPN2-201ENST00000309660 ANKRD63C9JTQ0 380 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 CYP26A1O43174 497 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 DAPK3O43293 454 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 ADRB2P07550 413 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 SMTNP53814 917 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 DMP1Q13316 513 aaPredicted RBP12.49□□□□□ -0.41
PTPN2-201ENST00000309660 LMBRD2Q68DH5 695 aaPredicted RBP12.49□□□□□ -0.41
PTPN2-201ENST00000309660 SWSAP1Q6NVH7 229 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 POMGNT1Q8WZA1 660 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 AGPAT1Q99943 283 aa12.49□□□□□ -0.41
PTPN2-201ENST00000309660 KMT5AQ9NQR1 393 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms