RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 RAD51AP2Q09MP3 1159 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 SNW1Q13573 536 aaKnown RBP19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 ALCAMQ13740 583 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 GPNMBQ14956 572 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 MAPK6Q16659 721 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 FAM187BQ17R55 369 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 PPP4R3CPQ6ZMV5 832 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 STXBP4Q6ZWJ1 553 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 DYMQ7RTS9 669 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 CATSPER4Q7RTX7 472 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 FAM178BQ8IXR5 827 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 MYCT1Q8N699 235 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 DNAJC19Q96DA6 116 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 CCDC51Q96ER9 411 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 PAGE5Q96GU1 130 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 PPP1R16BQ96T49 567 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 OLFML3Q9NRN5 406 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 DACT1Q9NYF0 836 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 ARHGAP28Q9P2N2 729 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 ST3GAL5Q9UNP4 418 aa19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 NOC2LQ9Y3T9 749 aaKnown RBP19.75■□□□□ 0.75
SSSCA1-201ENST00000309328 INO80B-WBP1J3KQ70 363 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 GTPBP6O43824 516 aaPredicted RBP19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 TRAK2O60296 914 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 ZSCAN20P17040 1043 aaPredicted RBP19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 PTMSP20962 102 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 CD52P31358 61 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 FAM228AQ86W67 206 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 DBF4BQ8NFT6 615 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 TMEM40Q8WWA1 233 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 HERVK_113Q902F9 699 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 HVCN1Q96D96 273 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 GTPBP4Q9BZE4 634 aaKnown RBP19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 ST6GALNAC4Q9H4F1 302 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 AGO3Q9H9G7 860 aaKnown RBP19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 CDHR5Q9HBB8 845 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 ERVK-5Q9HDB9 667 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 LTBP2Q14767 1821 aa19.74■□□□□ 0.75
SSSCA1-201ENST00000309328 IDEP14735 1019 aa19.73■□□□□ 0.75
SSSCA1-201ENST00000309328 NCKAP1LP55160 1127 aa19.73■□□□□ 0.75
SSSCA1-201ENST00000309328 MBTD1Q05BQ5 628 aa19.73■□□□□ 0.75
SSSCA1-201ENST00000309328 NFX1Q12986 1120 aaKnown RBP19.73■□□□□ 0.75
SSSCA1-201ENST00000309328 TMEM240Q5SV17 173 aa19.73■□□□□ 0.75
SSSCA1-201ENST00000309328 UNC13DQ70J99 1090 aa19.73■□□□□ 0.75
SSSCA1-201ENST00000309328 APBB1IPQ7Z5R6 666 aaPredicted RBP19.73■□□□□ 0.75
SSSCA1-201ENST00000309328 BSNDQ8WZ55 320 aa19.73■□□□□ 0.75
SSSCA1-201ENST00000309328 ZHX3Q9H4I2 956 aa19.73■□□□□ 0.75
SSSCA1-201ENST00000309328 C1orf112Q9NSG2 853 aa19.73■□□□□ 0.75
SSSCA1-201ENST00000309328 AGPAT5Q9NUQ2 364 aa19.73■□□□□ 0.75
SSSCA1-201ENST00000309328 PANK4Q9NVE7 773 aa19.73■□□□□ 0.75
SSSCA1-201ENST00000309328 NPHP3-ACAD11A0A0J9YXS1 232 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 DENND3A2RUS2 1198 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 K7ERI5 159 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 GADD45BO75293 160 aaPredicted RBP19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 SKIP12755 728 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 AFMP43652 599 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 KCNJ6P48051 423 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 STRN3Q13033 797 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 TPRNQ4KMQ1 711 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 HERC4Q5GLZ8 1057 aaPredicted RBP19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 NOTUMQ6P988 496 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 ZNF365Q70YC5 407 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 TMEM161BQ8NDZ6 487 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 TRAIPQ9BWF2 469 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 TSPYL2Q9H2G4 693 aaPredicted RBP19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 FZD8Q9H461 694 aa19.72■□□□□ 0.75
SSSCA1-201ENST00000309328 CEP290O15078 2479 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 EVPLQ92817 2033 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 SFI1A8K8P3 1242 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 ACKR2O00590 384 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 NR1I2O75469 434 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 SMC2O95347 1197 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 MBD3O95983 291 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 ACRP10323 421 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 RAB27AP51159 221 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 PSMD2Q13200 908 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 POSTNQ15063 836 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 C16orf59Q7L2K0 433 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 PHOSPHO2Q8TCD6 241 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 RSPH1Q8WYR4 309 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 VWCEQ96DN2 955 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 ZNF668Q96K58 619 aaPredicted RBP19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.71■□□□□ 0.754e-6■■■■□ 21.2
SSSCA1-201ENST00000309328 CCDC113Q9H0I3 377 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 MRPL44Q9H9J2 332 aaKnown RBP19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 LMBRD1Q9NUN5 540 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 RMND1Q9NWS8 449 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 PCDHB13Q9Y5F0 798 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 CNTNAP2Q9UHC6 1331 aa19.71■□□□□ 0.75
SSSCA1-201ENST00000309328 K7ENM7 598 aa19.7■□□□□ 0.74
SSSCA1-201ENST00000309328 AMHP03971 560 aa19.7■□□□□ 0.74
SSSCA1-201ENST00000309328 PRKCBP05771 671 aa19.7■□□□□ 0.74
SSSCA1-201ENST00000309328 CACNB1Q02641 598 aaPredicted RBP19.7■□□□□ 0.74
SSSCA1-201ENST00000309328 PRPF4BQ13523 1007 aaKnown RBP19.7■□□□□ 0.74
SSSCA1-201ENST00000309328 HAUS6Q7Z4H7 955 aa19.7■□□□□ 0.74
SSSCA1-201ENST00000309328 SFR1Q86XK3 245 aa19.7■□□□□ 0.74
SSSCA1-201ENST00000309328 STAMQ92783 540 aa19.7■□□□□ 0.74
SSSCA1-201ENST00000309328 SLC9A7Q96T83 725 aa19.7■□□□□ 0.74
SSSCA1-201ENST00000309328 MRPL4Q9BYD3 311 aaKnown RBP19.7■□□□□ 0.74
SSSCA1-201ENST00000309328 MINDY3Q9H8M7 445 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms