RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 PHKA2P46019 1235 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 SLC11A1P49279 550 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 GPC3P51654 580 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 ATXN1P54253 815 aaKnown RBP11.39□□□□□ -0.59
COL4A3-201ENST00000304990 ARHGAP8P85298 464 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 CACNA1BQ00975 2339 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 LMNB2Q03252 620 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 PTH1RQ03431 593 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 SYNE3Q6ZMZ3 975 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 GET4Q7L5D6 327 aaPredicted RBP11.39□□□□□ -0.59
COL4A3-201ENST00000304990 NIPA1Q7RTP0 329 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 MB21D2Q8IYB1 491 aaPredicted RBP11.39□□□□□ -0.59
COL4A3-201ENST00000304990 SMAP1Q8IYB5 467 aaPredicted RBP11.39□□□□□ -0.59
COL4A3-201ENST00000304990 SUMF1Q8NBK3 374 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 CMASQ8NFW8 434 aaPredicted RBP11.39□□□□□ -0.59
COL4A3-201ENST00000304990 PJA1Q8NG27 643 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 BCL7CQ8WUZ0 217 aaPredicted RBP11.39□□□□□ -0.59
COL4A3-201ENST00000304990 SMG7Q92540 1137 aaKnown RBP11.39□□□□□ -0.59
COL4A3-201ENST00000304990 PHKBQ93100 1093 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 PGBD4Q96DM1 585 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 BCO2Q9BYV7 579 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 FOXQ1Q9C009 403 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 RIC8AQ9NPQ8 531 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 CHST12Q9NRB3 414 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 NRBP2Q9NSY0 501 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 TBC1D22BQ9NU19 505 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 DNAJB4Q9UDY4 337 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 PIN4Q9Y237 131 aaKnown RBP11.39□□□□□ -0.59
COL4A3-201ENST00000304990 SSX2IPQ9Y2D8 614 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 PCDHA10Q9Y5I2 948 aa11.39□□□□□ -0.59
COL4A3-201ENST00000304990 MAFBQ9Y5Q3 323 aaPredicted RBP11.39□□□□□ -0.59
COL4A3-201ENST00000304990 PATJQ8NI35 1801 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 DCDC2BA2VCK2 349 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 SMCO2A6NFE2 343 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 POTEMA6NI47 508 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 SPTLC1O15269 473 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 N4BP1O75113 896 aaKnown RBP11.38□□□□□ -0.59
COL4A3-201ENST00000304990 CSDE1O75534 798 aaKnown RBP11.38□□□□□ -0.59
COL4A3-201ENST00000304990 GLUD1P00367 558 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 ALDH2P05091 517 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 NEFLP07196 543 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 MCM5P33992 734 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 SREBF1P36956 1147 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 CSTF1Q05048 431 aaKnown RBP11.38□□□□□ -0.59
COL4A3-201ENST00000304990 AP3B2Q13367 1082 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 WWC2Q6AWC2 1192 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 ZNF746Q6NUN9 644 aaPredicted RBP11.38□□□□□ -0.59
COL4A3-201ENST00000304990 PPP1R18Q6NYC8 613 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 POTEGQ6S5H5 508 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 CYP26C1Q6V0L0 522 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 SMC5Q8IY18 1101 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 BORCS6Q96GS4 357 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 TMEM87BQ96K49 555 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 MYADMQ96S97 322 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 EPS15L1Q9UBC2 864 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 FAN1Q9Y2M0 1017 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 TAF6LQ9Y6J9 622 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 MYH15Q9Y2K3 1946 aa11.38□□□□□ -0.59
COL4A3-201ENST00000304990 VPS13AQ96RL7 3174 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 LRRN2O75325 713 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 OATP04181 439 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 DNM2P50570 870 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 RAB27AP51159 221 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 SETQ01105 290 aaPredicted RBP11.37□□□□□ -0.59
COL4A3-201ENST00000304990 NUCB1Q02818 461 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 UBXN2BQ14CS0 331 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 JAKMIP3Q5VZ66 844 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 TMTC3Q6ZXV5 915 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 MICU3Q86XE3 530 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 FANCBQ8NB91 859 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 ST13P5Q8NFI4 369 aaPredicted RBP11.37□□□□□ -0.59
COL4A3-201ENST00000304990 DCBLD2Q96PD2 775 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 RTKNQ9BST9 563 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 INO80BQ9C086 356 aaPredicted RBP11.37□□□□□ -0.59
COL4A3-201ENST00000304990 GLT8D2Q9H1C3 349 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 FAM105AQ9NUU6 356 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL4A3-201ENST00000304990 DLGAP2Q9P1A6 1054 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 GMEB2Q9UKD1 530 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 DMDP11532 3685 aa11.37□□□□□ -0.59
COL4A3-201ENST00000304990 MTCL1Q9Y4B5 1905 aaKnown RBP11.37□□□□□ -0.59
COL4A3-201ENST00000304990 EP300Q09472 2414 aaPredicted RBP11.36□□□□□ -0.59
COL4A3-201ENST00000304990 FAM86B1E9PN63 330 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 SH2B2O14492 632 aaPredicted RBP11.36□□□□□ -0.59
COL4A3-201ENST00000304990 DHX15O43143 795 aaKnown RBP11.36□□□□□ -0.59
COL4A3-201ENST00000304990 OFD1O75665 1012 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 RFPL2O75678 378 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 IGHDP01880 384 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 FAM86B2P0C5J1 330 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 SPATA31D3P0C874 917 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 LAMP2P13473 410 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 CLCN6P51797 869 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 CDC42EP1Q00587 391 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 ZNF528Q3MIS6 628 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 SPATA31D4Q6ZUB0 917 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 CATSPER4Q7RTX7 472 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 ZNF280BQ86YH2 543 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 TEX2Q8IWB9 1127 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 TMEM175Q9BSA9 504 aa11.36□□□□□ -0.59
COL4A3-201ENST00000304990 MTA3Q9BTC8 594 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms