RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 USP17L20D6RJB6 530 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 PDXKO00764 312 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 TGFB1I1O43294 461 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 PAEPP09466 180 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 RPA1P27694 616 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 PPATQ06203 517 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 USP17L24Q0WX57 530 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 DCAF12L1Q5VU92 463 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 CDCA2Q69YH5 1023 aaPredicted RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 USP17L6PQ6QN14 398 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 ATP8B4Q8TF62 1192 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 NAP1L4Q99733 375 aaKnown RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 REEP2Q9BRK0 252 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 LRRC4BQ9NT99 713 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 CCNL1Q9UK58 526 aaPredicted RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 SH3BP1Q9Y3L3 701 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 BZW2Q9Y6E2 419 aaKnown RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 FRMPD4Q14CM0 1322 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 POTEFA5A3E0 1075 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 SPDYE5A6NIY4 337 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 FOXO6A8MYZ6 492 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 TBX3O15119 743 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 DDX3YO15523 660 aaKnown RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 POTEIP0CG38 1075 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 NQO1P15559 274 aaKnown RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 PLTPP55058 493 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 EIF6P56537 245 aaKnown RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 BIRC3Q13489 604 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 CUL1Q13616 776 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 SLC15A2Q16348 729 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 HERC4Q5GLZ8 1057 aaPredicted RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 MEX3CQ5U5Q3 659 aaKnown RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 POTEGQ6S5H5 508 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 POTEEQ6S8J3 1075 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 CNBD1Q8NA66 436 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 GDAP1Q8TB36 358 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 LNX1Q8TBB1 728 aaPredicted RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 MAGEC3Q8TD91 643 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 AZI2Q9H6S1 392 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 FGFR1OP2Q9NVK5 253 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 SUCLA2Q9P2R7 463 aaPredicted RBP8.58□□□□□ -1.04
NKRF-201ENST00000304449 NCANO14594 1321 aa8.58□□□□□ -1.04
NKRF-201ENST00000304449 C5orf60A6NFR6 353 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 FAM86B1E9PN63 330 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 SLC16A3O15427 465 aaKnown RBP8.57□□□□□ -1.04
NKRF-201ENST00000304449 FAM86B2P0C5J1 330 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 LINGO3P0C6S8 592 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 GYS1P13807 737 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 ATP2A2P16615 1042 aaKnown RBP8.57□□□□□ -1.04
NKRF-201ENST00000304449 NR2F2P24468 414 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 CIITAP33076 1130 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 ABL2P42684 1182 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 PAPOLAP51003 745 aaKnown RBP8.57□□□□□ -1.04
NKRF-201ENST00000304449 RPS6KA3P51812 740 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 MCCD1P59942 119 aaPredicted RBP8.57□□□□□ -1.04
NKRF-201ENST00000304449 LACTBP83111 547 aaPredicted RBP8.57□□□□□ -1.04
NKRF-201ENST00000304449 ATP11AP98196 1134 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 SHROOM1Q2M3G4 852 aaPredicted RBP8.57□□□□□ -1.04
NKRF-201ENST00000304449 QRICH1Q2TAL8 776 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 APOBEC3HQ6NTF7 200 aaKnown RBP8.57□□□□□ -1.04
NKRF-201ENST00000304449 KCTD1Q719H9 257 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 SLF2Q8IX21 1173 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.57□□□□□ -1.04
NKRF-201ENST00000304449 KCNK9Q9NPC2 374 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 SERPINB13Q9UIV8 391 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 DBR1Q9UK59 544 aaKnown RBP8.57□□□□□ -1.04
NKRF-201ENST00000304449 COL11A2P13942 1736 aaPredicted RBP8.57□□□□□ -1.04
NKRF-201ENST00000304449 SPDYE3A6NKU9 549 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 RGS16O15492 202 aaPredicted RBP8.57□□□□□ -1.04
NKRF-201ENST00000304449 MAP3K13O43283 966 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 AFPP02771 609 aaKnown RBP8.57□□□□□ -1.04
NKRF-201ENST00000304449 ATP4AP20648 1035 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 CASP4P49662 377 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 KCNA1Q09470 495 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 LACTB2Q53H82 288 aaPredicted RBP8.57□□□□□ -1.04
NKRF-201ENST00000304449 ZFPM1Q8IX07 1006 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 ANO3Q9BYT9 981 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 ZFATQ9P243 1243 aa8.57□□□□□ -1.04
NKRF-201ENST00000304449 UBAP1LF5GYI3 381 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 BBOX1O75936 387 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 ERFP50548 548 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 RAB27AP51159 221 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 NUGGCQ68CJ6 796 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 ALKBH5Q6P6C2 394 aaKnown RBP8.56□□□□□ -1.04
NKRF-201ENST00000304449 SLFN12Q8IYM2 578 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 PAIP2Q9BPZ3 127 aaKnown RBP8.56□□□□□ -1.04
NKRF-201ENST00000304449 DDX23Q9BUQ8 820 aaKnown RBP8.56□□□□□ -1.04
NKRF-201ENST00000304449 MXD3Q9BW11 206 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 STRA6Q9BX79 667 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 OLFML3Q9NRN5 406 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 ZMYND8Q9ULU4 1186 aaPredicted RBP8.56□□□□□ -1.04
NKRF-201ENST00000304449 NOC2LQ9Y3T9 749 aaKnown RBP8.56□□□□□ -1.04
NKRF-201ENST00000304449 NR2E1Q9Y466 385 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 SPATA31A6Q5VVP1 1343 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 LRRD1A4D1F6 860 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 RSPH10B2B2RC85 870 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 CETN3O15182 167 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 HIP1RO75146 1068 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 RSPH10BP0C881 870 aa8.56□□□□□ -1.04
NKRF-201ENST00000304449 SREBF1P36956 1147 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms