RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 NOP56O00567 594 aaKnown RBP24.32■■□□□ 1.48
SMAD1-201ENST00000302085 MAPK13O15264 365 aa24.32■■□□□ 1.48
SMAD1-201ENST00000302085 KIF5CO60282 957 aa24.32■■□□□ 1.48
SMAD1-201ENST00000302085 KRT13P13646 458 aa24.32■■□□□ 1.48
SMAD1-201ENST00000302085 DLG4P78352 724 aa24.32■■□□□ 1.48
SMAD1-201ENST00000302085 ASTE1Q2TB18 679 aaPredicted RBP24.32■■□□□ 1.48
SMAD1-201ENST00000302085 INTS8Q75QN2 995 aaKnown RBP24.32■■□□□ 1.48
SMAD1-201ENST00000302085 GPR142Q7Z601 462 aa24.32■■□□□ 1.48
SMAD1-201ENST00000302085 TRIM50Q86XT4 487 aa24.32■■□□□ 1.48
SMAD1-201ENST00000302085 SLC7A3Q8WY07 619 aa24.32■■□□□ 1.48
SMAD1-201ENST00000302085 GLG1Q92896 1179 aa24.32■■□□□ 1.48
SMAD1-201ENST00000302085 TRIM10Q9UDY6 481 aa24.32■■□□□ 1.48
SMAD1-201ENST00000302085 TFR2Q9UP52 801 aa24.32■■□□□ 1.48
SMAD1-201ENST00000302085 FHOD1Q9Y613 1164 aa24.32■■□□□ 1.48
SMAD1-201ENST00000302085 GOLGA8IPA6NC78 632 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 GOLGA8JA6NMD2 632 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 VAMP7P51809 220 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 MCCD1P59942 119 aaPredicted RBP24.31■■□□□ 1.48
SMAD1-201ENST00000302085 MAPK8IP2Q13387 824 aaPredicted RBP24.31■■□□□ 1.48
SMAD1-201ENST00000302085 ZNF662Q6ZS27 426 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 PLPPR4Q7Z2D5 763 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 PLEKHO2Q8TD55 490 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 TSC1Q92574 1164 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 KCNG1Q9UIX4 513 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 IVNS1ABPQ9Y6Y0 642 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 RCCD1A6NED2 376 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 CTIFO43310 598 aaKnown RBP24.31■■□□□ 1.48
SMAD1-201ENST00000302085 LCA5LO95447 670 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 RAPGEF1Q13905 1077 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 C1orf220Q5T0J3 134 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 CHADLQ6NUI6 762 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 FAM167AQ96KS9 214 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 FBXL5Q9UKA1 691 aa24.31■■□□□ 1.48
SMAD1-201ENST00000302085 AJAP1Q9UKB5 411 aaPredicted RBP24.31■■□□□ 1.48
SMAD1-201ENST00000302085 PLXNA1Q9UIW2 1896 aa24.3■■□□□ 1.48
SMAD1-201ENST00000302085 SSU72P8A0A1W2PR75 194 aa24.3■■□□□ 1.48
SMAD1-201ENST00000302085 H0YCG3 227 aa24.3■■□□□ 1.48
SMAD1-201ENST00000302085 MAFO75444 373 aaPredicted RBP24.3■■□□□ 1.48
SMAD1-201ENST00000302085 SERPING1P05155 500 aa24.3■■□□□ 1.48
SMAD1-201ENST00000302085 ADRB2P07550 413 aa24.3■■□□□ 1.48
SMAD1-201ENST00000302085 MARK3P27448 753 aa24.3■■□□□ 1.48
SMAD1-201ENST00000302085 KIF11P52732 1056 aa24.3■■□□□ 1.48
SMAD1-201ENST00000302085 FAM110CQ1W6H9 321 aa24.3■■□□□ 1.48
SMAD1-201ENST00000302085 ZNF569Q5MCW4 686 aa24.3■■□□□ 1.48
SMAD1-201ENST00000302085 MAMDC4Q6UXC1 1216 aa24.3■■□□□ 1.48
SMAD1-201ENST00000302085 ZNF467Q7Z7K2 595 aaPredicted RBP24.3■■□□□ 1.48
SMAD1-201ENST00000302085 BBXQ8WY36 941 aaPredicted RBP24.3■■□□□ 1.48
SMAD1-201ENST00000302085 HAUS4Q9H6D7 363 aa24.3■■□□□ 1.48
SMAD1-201ENST00000302085 DYNC1I1O14576 645 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 PLCB4Q15147 1175 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 SLC9C1Q4G0N8 1177 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 BRDTQ58F21 947 aaPredicted RBP24.29■■□□□ 1.48
SMAD1-201ENST00000302085 GJB7Q6PEY0 223 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 KCNN1Q92952 543 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 SAAL1Q96ER3 474 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 LACRTQ9GZZ8 138 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 RBM47A0AV96 593 aaKnown RBP24.29■■□□□ 1.48
SMAD1-201ENST00000302085 ZBTB42B2RXF5 422 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 SNAI1O95863 264 aaPredicted RBP24.29■■□□□ 1.48
SMAD1-201ENST00000302085 NAMPTP43490 491 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 PPP3CAQ08209 521 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 GRB14Q14449 540 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 KIAA1328Q86T90 577 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 CBWD2Q8IUF1 395 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 ATP8B4Q8TF62 1192 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 KATNBL1Q9H079 304 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 DEF6Q9H4E7 631 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 VTA1Q9NP79 307 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.29■■□□□ 1.48
SMAD1-201ENST00000302085 GUCA1BQ9UMX6 200 aa24.29■■□□□ 1.48
SMAD1-201ENST00000302085 EMSYQ7Z589 1322 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 AKR1B10O60218 316 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 URI1O94763 535 aaPredicted RBP24.28■■□□□ 1.48
SMAD1-201ENST00000302085 IPO7O95373 1038 aaKnown RBP24.28■■□□□ 1.48
SMAD1-201ENST00000302085 MYL7Q01449 175 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 ARHGAP1Q07960 439 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 SPA17Q15506 151 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 ASIC2Q16515 512 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 GJC2Q5T442 439 aaPredicted RBP24.28■■□□□ 1.48
SMAD1-201ENST00000302085 IQCEQ6IPM2 695 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 IRF2BP2Q7Z5L9 587 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 PLEKHH3Q7Z736 793 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 RASAL3Q86YV0 1011 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 JAKMIP2Q96AA8 810 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 INTS2Q9H0H0 1204 aaKnown RBP24.28■■□□□ 1.48
SMAD1-201ENST00000302085 MYO6Q9UM54 1294 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 PPME1Q9Y570 386 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 PCDHA13Q9Y5I0 950 aa24.28■■□□□ 1.48
SMAD1-201ENST00000302085 ABCD1P33897 745 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 JAM2P57087 298 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 DRP2Q13474 957 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 SNRNP35Q16560 246 aaKnown RBP24.27■■□□□ 1.48
SMAD1-201ENST00000302085 DPP9Q86TI2 863 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 SLC35F6Q8N357 371 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 LMO3Q8TAP4 145 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 FBXL18Q96ME1 805 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 SPAG5Q96R06 1193 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 ZNF157P51786 506 aaPredicted RBP24.27■■□□□ 1.48
SMAD1-201ENST00000302085 ARID5AQ03989 594 aa24.27■■□□□ 1.48
SMAD1-201ENST00000302085 TDRD12Q587J7 1177 aaKnown RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms