RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 FAM71BQ8TC56 605 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 PPP1R13LQ8WUF5 828 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 CASKIN2Q8WXE0 1202 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 NAP1L4Q99733 375 aaKnown RBP16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 TMX2Q9Y320 296 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 SNX24Q9Y343 169 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 TNS1Q9HBL0 1735 aaKnown RBP16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 GOLGA6L10A6NI86 522 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 SART1O43290 800 aaKnown RBP16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 SEC24CP53992 1094 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 NNTQ13423 1086 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 IRF2BP2Q7Z5L9 587 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 GANQ9H2C0 597 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 VIPAS39Q9H9C1 493 aa16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 NOC2LQ9Y3T9 749 aaKnown RBP16.9■□□□□ 0.3
CHAF1A-201ENST00000301280 IGSF9BQ9UPX0 1349 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 PDXKO00764 312 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 FTLP02792 175 aaPredicted RBP16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 TNNI1P19237 187 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 MARCKSL1P49006 195 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 TTLL12Q14166 644 aaPredicted RBP16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 HAUS6Q7Z4H7 955 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 ARHGEF19Q8IW93 802 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 FAM151AQ8WW52 585 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 SYN2Q92777 582 aaPredicted RBP16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 GABBR1Q9UBS5 961 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 PPP1R9AQ9ULJ8 1098 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 ACOT2P49753 483 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 TNNC1P63316 161 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 HP1BP3Q5SSJ5 553 aaPredicted RBP16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 SNRNP48Q6IEG0 339 aaKnown RBP16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 IPO4Q8TEX9 1081 aaKnown RBP16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 GMCL1Q96IK5 515 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 EHMT1Q9H9B1 1298 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 GINS2Q9Y248 185 aa16.89■□□□□ 0.29
CHAF1A-201ENST00000301280 IGLV3-22A0A075B6J6 115 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 ASNSP08243 561 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 MCM3P25205 808 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 LIG3P49916 1009 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 RNF207Q6ZRF8 634 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 ZNF720Q7Z2F6 126 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 TEX2Q8IWB9 1127 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 RPUSD2Q8IZ73 545 aaKnown RBP16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 TMEM143Q96AN5 459 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 HSD17B14Q9BPX1 270 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 FAM213AQ9BRX8 229 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 HEMGNQ9BXL5 484 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 CWC15Q9P013 229 aaKnown RBP16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 AMFRQ9UKV5 643 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 ATP8B3O60423 1300 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 LRRIQ4A6NIV6 560 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 KIF4AO95239 1232 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 YWHABP31946 246 aaKnown RBP16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 CTNNA1P35221 906 aaKnown RBP16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 FLT3P36888 993 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 AARSP49588 968 aaKnown RBP eCLIP16.88■□□□□ 0.293e-6■□□□□ 10.9
CHAF1A-201ENST00000301280 PPP3CAQ08209 521 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 PHLDB3Q6NSJ2 640 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 DPY19L2P1Q6NXN4 242 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 C1orf186Q6ZWK4 172 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 NLRX1Q86UT6 975 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 KLHL11Q9NVR0 708 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 DENND3A2RUS2 1198 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 CSDE1O75534 798 aaKnown RBP16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 CETN1Q12798 172 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 ITGB3BPQ13352 177 aaPredicted RBP16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 EPHA7Q15375 998 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 CIAPIN1Q6FI81 312 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 MICALL2Q8IY33 904 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
CHAF1A-201ENST00000301280 ENTPD3O75355 529 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 PSMD10O75832 226 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 SGPL1O95470 568 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 MKRN3Q13064 507 aaKnown RBP16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 STXBP4Q6ZWJ1 553 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 CCDC50Q8IVM0 306 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 MLXIPLQ9NP71 852 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 PLAAQ9Y263 795 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 SSU72P8A0A1W2PR75 194 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 NDUFAB1O14561 156 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 GJB6O95452 261 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 SPOPLQ6IQ16 392 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 FRMD5Q7Z6J6 570 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 ZBTB10Q96DT7 871 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 METTL14Q9HCE5 456 aaKnown RBP16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 MYOZ2Q9NPC6 264 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 RNF146Q9NTX7 359 aa16.87■□□□□ 0.29
CHAF1A-201ENST00000301280 ZBTB33Q86T24 672 aa16.86■□□□□ 0.29
CHAF1A-201ENST00000301280 PRPF38AQ8NAV1 312 aaKnown RBP16.86■□□□□ 0.29
CHAF1A-201ENST00000301280 LNX1Q8TBB1 728 aaPredicted RBP16.86■□□□□ 0.29
CHAF1A-201ENST00000301280 MGARPQ8TDB4 240 aa16.86■□□□□ 0.29
CHAF1A-201ENST00000301280 MXRA8Q9BRK3 442 aa16.86■□□□□ 0.29
CHAF1A-201ENST00000301280 HERC5Q9UII4 1024 aaKnown RBP16.86■□□□□ 0.29
CHAF1A-201ENST00000301280 TMOD1P28289 359 aa16.86■□□□□ 0.29
CHAF1A-201ENST00000301280 MXI1P50539 228 aa16.86■□□□□ 0.29
CHAF1A-201ENST00000301280 MICALL1Q8N3F8 863 aa16.86■□□□□ 0.29
CHAF1A-201ENST00000301280 SELENOSQ9BQE4 189 aa16.86■□□□□ 0.29
CHAF1A-201ENST00000301280 CAPS2Q9BXY5 557 aa16.86■□□□□ 0.29
CHAF1A-201ENST00000301280 DEFB129Q9H1M3 183 aa16.86■□□□□ 0.29
CHAF1A-201ENST00000301280 ATRNL1Q5VV63 1379 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms