RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 STAT3P40763 770 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 MEX3CQ5U5Q3 659 aaKnown RBP11.81□□□□□ -0.52
SNX20-201ENST00000300590 RFX8Q6ZV50 586 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 DZIP1Q86YF9 867 aaKnown RBP11.81□□□□□ -0.52
SNX20-201ENST00000300590 CYP4X1Q8N118 509 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 FAM13CQ8NE31 585 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 DTX3LQ8TDB6 740 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 STK32AQ8WU08 396 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 FAM84BQ96KN1 310 aaPredicted RBP11.81□□□□□ -0.52
SNX20-201ENST00000300590 SLCO1B3Q9NPD5 702 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 NKIRAS1Q9NYS0 192 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 ASIC3Q9UHC3 531 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 TIAM2Q8IVF5 1701 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 FAM187AA6NFU0 413 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 BTNL10A8MVZ5 291 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 OAS1P00973 400 aaKnown RBP11.81□□□□□ -0.52
SNX20-201ENST00000300590 TPBGLP0DKB5 382 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 DIXDC1Q155Q3 683 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 TSNAXIP1Q2TAA8 658 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 BICDL1Q6ZP65 573 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 PRUNE1Q86TP1 453 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 ZDHHC14Q8IZN3 488 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 CCDC24Q8N4L8 307 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 ANKLE1Q8NAG6 615 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 RDH13Q8NBN7 331 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 TGFBRAP1Q8WUH2 860 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 KIAA1683Q9H0B3 1180 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 DUOX1Q9NRD9 1551 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 MYH3P11055 1940 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 USP54Q70EL1 1684 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 A0A1W2PRG0 241 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 RTN3O95197 1032 aaPredicted RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 ROR2Q01974 943 aaKnown RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 KCNA1Q09470 495 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 PABPC4Q13310 644 aaKnown RBP eCLIP11.8□□□□□ -0.52
SNX20-201ENST00000300590 RCN2Q14257 317 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 CGB2Q6NT52 195 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 CAPN12Q6ZSI9 719 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 MAPKAPK5Q8IW41 473 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 C1orf54Q8WWF1 131 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 RFFLQ8WZ73 363 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 BTBD6Q96KE9 485 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 DDX50Q9BQ39 737 aaKnown RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 LRRC27Q9C0I9 530 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 TAOK3Q9H2K8 898 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 ATP8A2Q9NTI2 1148 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 ATMINO43313 823 aaPredicted RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 MRPS35P82673 323 aaKnown RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 NUP188Q5SRE5 1749 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 HP1BP3Q5SSJ5 553 aaPredicted RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 ZC3H18Q86VM9 953 aaKnown RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 TEX9Q8N6V9 391 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 PHC3Q8NDX5 983 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 B4GALNT2Q8NHY0 566 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 CKAP2Q8WWK9 683 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 LRRC37BQ96QE4 947 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 TBC1D10AQ9BXI6 508 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 KCTD10Q9H3F6 313 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 CCDC134Q9H6E4 229 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 GPCPD1Q9NPB8 672 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 COG5Q9UP83 839 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 GSTTP1A0A1W2PQM5 241 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 POTEFA5A3E0 1075 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 PALM3A6NDB9 673 aaPredicted RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 GJB6O95452 261 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 POTEIP0CG38 1075 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 CYP19A1P11511 503 aaPredicted RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 RARGP13631 454 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 ATF3P18847 181 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 ATP6V1C1P21283 382 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 SP100P23497 879 aaPredicted RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 PTGIRP43119 386 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 DHX34Q14147 1143 aaKnown RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 DRAP1Q14919 205 aaPredicted RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 PDCD2Q16342 344 aaPredicted RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 ZC3H12AQ5D1E8 599 aaKnown RBP11.8□□□□□ -0.52
SNX20-201ENST00000300590 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 POTEEQ6S8J3 1075 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 EPAS1Q99814 870 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 NT5C3AQ9H0P0 336 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 CARD9Q9H257 536 aa11.8□□□□□ -0.52
SNX20-201ENST00000300590 KIF13AQ9H1H9 1805 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 USP17L5A8MUK1 530 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 LIN7AO14910 233 aaPredicted RBP11.79□□□□□ -0.52
SNX20-201ENST00000300590 PHF2O75151 1096 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 GNAZP19086 355 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 FOXN2P32314 431 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 CHKAP35790 457 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 ARHGAP27Q6ZUM4 889 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 MFN1Q8IWA4 741 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 TXLNGQ9NUQ3 528 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 CYP39A1Q9NYL5 469 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 DDX25Q9UHL0 483 aaKnown RBP11.79□□□□□ -0.52
SNX20-201ENST00000300590 CNOT7Q9UIV1 285 aaKnown RBP11.79□□□□□ -0.52
SNX20-201ENST00000300590 LRRC42Q9Y546 428 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 CAMTA1Q9Y6Y1 1673 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 THAP12O43422 761 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 TOM1O60784 492 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 SFR1Q86XK3 245 aa11.79□□□□□ -0.52
SNX20-201ENST00000300590 ZNF34Q8IZ26 560 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms