RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 KRT83P78385 493 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 APBA1Q02410 837 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 TARBP2Q15633 366 aaKnown RBP15.56■□□□□ 0.08
C9orf3-202ENST00000297979 CHADLQ6NUI6 762 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 ATRIPQ8WXE1 791 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 SYN2Q92777 582 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-202ENST00000297979 SPATA33Q96N06 139 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 GCNT4Q9P109 453 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 EIF3CLB5ME19 914 aaKnown RBP15.56■□□□□ 0.08
C9orf3-202ENST00000297979 IPO7O95373 1038 aaKnown RBP15.56■□□□□ 0.08
C9orf3-202ENST00000297979 FMO5P49326 533 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 INTS8Q75QN2 995 aaKnown RBP15.56■□□□□ 0.08
C9orf3-202ENST00000297979 ZNF467Q7Z7K2 595 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-202ENST00000297979 RDH13Q8NBN7 331 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 GLG1Q92896 1179 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 TMEM143Q96AN5 459 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 CCDC42Q96M95 316 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 EIF3CQ99613 913 aaKnown RBP15.56■□□□□ 0.08
C9orf3-202ENST00000297979 PDGFCQ9NRA1 345 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 ARHGAP20Q9P2F6 1191 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 ARHGAP28Q9P2N2 729 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 DIS3Q9Y2L1 958 aaKnown RBP15.56■□□□□ 0.08
C9orf3-202ENST00000297979 PPME1Q9Y570 386 aa15.56■□□□□ 0.08
C9orf3-202ENST00000297979 MAPK13O15264 365 aa15.55■□□□□ 0.08
C9orf3-202ENST00000297979 ACTN1P12814 892 aa15.55■□□□□ 0.08
C9orf3-202ENST00000297979 GTF2F1P35269 517 aaKnown RBP eCLIP15.55■□□□□ 0.081e-6■■■■□ 26.4
C9orf3-202ENST00000297979 KLHDC7AQ5VTJ3 777 aa15.55■□□□□ 0.08
C9orf3-202ENST00000297979 SFMBT2Q5VUG0 894 aa15.55■□□□□ 0.08
C9orf3-202ENST00000297979 DPY19L2P1Q6NXN4 242 aa15.55■□□□□ 0.08
C9orf3-202ENST00000297979 GPR142Q7Z601 462 aa15.55■□□□□ 0.08
C9orf3-202ENST00000297979 VTA1Q9NP79 307 aa15.55■□□□□ 0.08
C9orf3-202ENST00000297979 EMSYQ7Z589 1322 aa15.55■□□□□ 0.08
C9orf3-202ENST00000297979 PLEKP08567 350 aaPredicted RBP15.55■□□□□ 0.08
C9orf3-202ENST00000297979 TRIM49P0CI25 452 aa15.55■□□□□ 0.08
C9orf3-202ENST00000297979 TRIM49CP0CI26 452 aa15.55■□□□□ 0.08
C9orf3-202ENST00000297979 PLPPR4Q7Z2D5 763 aa15.55■□□□□ 0.08
C9orf3-202ENST00000297979 COPS5Q92905 334 aa15.55■□□□□ 0.08
C9orf3-202ENST00000297979 ANKRD63C9JTQ0 380 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 KIF5CO60282 957 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 UCHL3P15374 230 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 SCP2P22307 547 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 CNGA1P29973 690 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 ARL2P36404 184 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 GRB14Q14449 540 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 FBXL5Q9UKA1 691 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 ARHGAP25P42331 645 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 TRIM50Q86XT4 487 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 RASAL3Q86YV0 1011 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 ASAP3Q8TDY4 903 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 WDR24Q96S15 920 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 DEF6Q9H4E7 631 aa15.54■□□□□ 0.08
C9orf3-202ENST00000297979 TTC36A6NLP5 189 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 FANCGO15287 622 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 GLRA2P23416 452 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 MARK3P27448 753 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 ADSSP30520 456 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 MAPK4P31152 587 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 EIF4A3P38919 411 aaKnown RBP15.53■□□□□ 0.08
C9orf3-202ENST00000297979 NAMPTP43490 491 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 VAMP7P51809 220 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 MYL7Q01449 175 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 DMTNQ08495 405 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 RAPGEF1Q13905 1077 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 BRDTQ58F21 947 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-202ENST00000297979 EP400NLQ6ZTU2 488 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 ATP8B4Q8TF62 1192 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 KCNN1Q92952 543 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 SIX2Q9NPC8 291 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 FHOD1Q9Y613 1164 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 SSU72P8A0A1W2PR75 194 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 MAFO75444 373 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-202ENST00000297979 SERPING1P05155 500 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 CASQ1P31415 396 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 ZNF157P51786 506 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-202ENST00000297979 KIF11P52732 1056 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 SPA17Q15506 151 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 SLC9C1Q4G0N8 1177 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 CBWD6Q4V339 395 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 CBWD3Q5JTY5 395 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 CBWD5Q5RIA9 395 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 TMEM63BQ5T3F8 832 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 TAPT1Q6NXT6 567 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 TAS1R3Q7RTX0 852 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 PLEKHH3Q7Z736 793 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 KIAA1328Q86T90 577 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 DPP9Q86TI2 863 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 IRX2Q9BZI1 471 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-202ENST00000297979 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-202ENST00000297979 SIP14410 1827 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 HNRNPDLO14979 420 aaKnown RBP15.53■□□□□ 0.08
C9orf3-202ENST00000297979 TLR2O60603 784 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 SLC26A2P50443 739 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 HGSNATQ68CP4 663 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 SLC39A4Q6P5W5 647 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 ZNF662Q6ZS27 426 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 DEPTORQ8TB45 409 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 BICD1Q96G01 975 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 SPAG5Q96R06 1193 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 SMARCAD1Q9H4L7 1026 aa15.53■□□□□ 0.08
C9orf3-202ENST00000297979 HAUS4Q9H6D7 363 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms