RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 TRIM49P0CI25 452 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 TRIM49CP0CI26 452 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 MCPH1Q8NEM0 835 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 ZNF512BQ96KM6 892 aaPredicted RBP17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 CNOT7Q9UIV1 285 aaKnown RBP17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 ABCB11O95342 1321 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 WDR64B1ANS9 1081 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 TRIM66O15016 1216 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 CAV1Q03135 178 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 SLC18A3Q16572 532 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 RBM41Q96IZ5 413 aaKnown RBP17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 C7orf25Q9BPX7 421 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 ZBED2Q9BTP6 218 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 RPF1Q9H9Y2 349 aaKnown RBP17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 INO80Q9ULG1 1556 aaPredicted RBP17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 PFDN6O15212 129 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 BRAFP15056 766 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 CCDC137Q6PK04 289 aaKnown RBP17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 LRRC4Q9HBW1 653 aa17.15■□□□□ 0.34
ARHGEF28-201ENST00000296794 PSMA2P25787 234 aa17.14■□□□□ 0.34
ARHGEF28-201ENST00000296794 VAMP7P51809 220 aa17.14■□□□□ 0.34
ARHGEF28-201ENST00000296794 PDIA5Q14554 519 aa17.14■□□□□ 0.34
ARHGEF28-201ENST00000296794 FRMD5Q7Z6J6 570 aa17.14■□□□□ 0.34
ARHGEF28-201ENST00000296794 DNAAF3Q8N9W5 541 aa17.14■□□□□ 0.34
ARHGEF28-201ENST00000296794 PPP1R16BQ96T49 567 aa17.14■□□□□ 0.34
ARHGEF28-201ENST00000296794 SSU72P8A0A1W2PR75 194 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 H0Y3Z8 333 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 CSF1RP07333 972 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 SOX5P35711 763 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 KRT76Q01546 638 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 TTLL4Q14679 1199 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 PASD1Q8IV76 773 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 MICALL2Q8IY33 904 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 SYT2Q8N9I0 419 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 TTC17Q96AE7 1141 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 ARL4CP56559 192 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 PDE1CQ14123 709 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 LRRC14Q15048 493 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 RBBP5Q15291 538 aaKnown RBP17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 RNPC3Q96LT9 517 aaKnown RBP17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 C11orf70Q9BRQ4 267 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 TRIM55Q9BYV6 548 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 SLC12A6Q9UHW9 1150 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 ANGPTL2Q9UKU9 493 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 SLC16A4O15374 487 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 ZBED1O96006 694 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 ARL4AP40617 200 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 ARPP19P56211 112 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 NR1H3Q13133 447 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 PDIA6Q15084 440 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 HSP90AA5PQ58FG0 334 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 PCGF5Q86SE9 256 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 SLC38A10Q9HBR0 1119 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 SMARCAL1Q9NZC9 954 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 ZWINTO95229 277 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 MDH1P40925 334 aaKnown RBP17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 PRPSAP1Q14558 356 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 ARMCX2Q7L311 632 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 ACAD9Q9H845 621 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 SEL1LQ9UBV2 794 aa17.14■□□□□ 0.33
ARHGEF28-201ENST00000296794 EIF3HO15372 352 aaKnown RBP eCLIP17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 ATG16L1Q676U5 607 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 TRIM59Q8IWR1 403 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 DDX27Q96GQ7 796 aaKnown RBP17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 LRGUKQ96M69 825 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 TTC7AQ9ULT0 858 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 ZNF394Q53GI3 561 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 PARP9Q8IXQ6 854 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 ELOA2Q8IYF1 753 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 RBM12Q9NTZ6 932 aaKnown RBP17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 SALL3Q9BXA9 1300 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 PPP1R3GB7ZBB8 358 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 MEFVO15553 781 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 XPAP23025 273 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 SMIM5Q71RC9 77 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 RNF25Q96BH1 459 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 EPN3Q9H201 632 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 NPHP3-ACAD11A0A0J9YXS1 232 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 DHX34Q14147 1143 aaKnown RBP17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 JADE1Q6IE81 842 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 ZNF34Q8IZ26 560 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 HSPH1Q92598 858 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 HDAC11Q96DB2 347 aa17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 TGS1Q96RS0 853 aaKnown RBP17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 MAGED2Q9UNF1 606 aaPredicted RBP17.13■□□□□ 0.33
ARHGEF28-201ENST00000296794 SPATA31A5Q5VU36 1347 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 SPATA31A7Q8IWB4 1347 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 IQGAP1P46940 1657 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 KRT37O76014 449 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 USP11P51784 963 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 PTPAQ15257 358 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 MFSD14CQ5VZR4 134 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 ATP8B3O60423 1300 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 NEXMIFQ5QGS0 1516 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 ATP5HO75947 161 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 CAMTA2O94983 1202 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 LDHAP00338 332 aaKnown RBP17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 DEPDC1BQ8WUY9 529 aa17.12■□□□□ 0.33
ARHGEF28-201ENST00000296794 WNT8AQ9H1J5 351 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms