RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ADAM21Q9UKJ8 722 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 USTQ9Y2C2 406 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 ARID2Q68CP9 1835 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 SPOPO43791 374 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 HPDP32754 393 aaPredicted RBP10.09□□□□□ -0.79
PRDM9-201ENST00000296682 VPS41P49754 854 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 RARRES1P49788 294 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 LIG4P49917 911 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 VAMP7P51809 220 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 SETQ01105 290 aaPredicted RBP10.09□□□□□ -0.79
PRDM9-201ENST00000296682 DMTNQ08495 405 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 HGSNATQ68CP4 663 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 FAM83AQ86UY5 434 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 PASD1Q8IV76 773 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 XXYLT1Q8NBI6 393 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 PPP1R13LQ8WUF5 828 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 SLC20A1Q8WUM9 679 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 IFT74Q96LB3 600 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 SELENOOQ9BVL4 669 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 TLR10Q9BXR5 811 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 ELP3Q9H9T3 547 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 HSPBP1Q9NZL4 362 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 NAGPAQ9UK23 515 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 PPP1R9AQ9ULJ8 1098 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 WDR64B1ANS9 1081 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 VWA5AO00534 786 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 CSDE1O75534 798 aaKnown RBP10.09□□□□□ -0.79
PRDM9-201ENST00000296682 PGK2P07205 417 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 BACE1P56817 501 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 PGM5Q15124 567 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 CCDC25Q86WR0 208 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 SULF1Q8IWU6 871 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 MSANTD4Q8NCY6 345 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 DHX38Q92620 1227 aaKnown RBP10.09□□□□□ -0.79
PRDM9-201ENST00000296682 BTBD6Q96KE9 485 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 CCDC113Q9H0I3 377 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 FAM204AQ9H8W3 233 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 AS3MTQ9HBK9 375 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 TAS2R14Q9NYV8 317 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 RSPH14Q9UHP6 348 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 CSADQ9Y600 493 aa10.09□□□□□ -0.79
PRDM9-201ENST00000296682 CTNND1O60716 968 aaKnown RBP10.08□□□□□ -0.8
PRDM9-201ENST00000296682 BCRP11274 1271 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 GGCXP38435 758 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 GHRHRQ02643 423 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 BFSP1Q12934 665 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 DPY19L2P1Q6NXN4 242 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 AGO4Q9HCK5 861 aaKnown RBP10.08□□□□□ -0.8
PRDM9-201ENST00000296682 ZNF536O15090 1300 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 FTLP02792 175 aaPredicted RBP10.08□□□□□ -0.8
PRDM9-201ENST00000296682 CARSP49589 748 aaKnown RBP10.08□□□□□ -0.8
PRDM9-201ENST00000296682 PSMC5P62195 406 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 GRM1Q13255 1194 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 OTUD6AQ7L8S5 288 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 UBLCP1Q8WVY7 318 aaPredicted RBP10.08□□□□□ -0.8
PRDM9-201ENST00000296682 TRAF3IP3Q9Y228 551 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 PTPN22Q9Y2R2 807 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 PCDHA10Q9Y5I2 948 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 A0A0G2JMZ2 1700 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 NOP56O00567 594 aaKnown RBP10.08□□□□□ -0.8
PRDM9-201ENST00000296682 CCND2P30279 289 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 MAP3K10Q02779 954 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 PALB2Q86YC2 1186 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 CREG2Q8IUH2 290 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 DEPTORQ8TB45 409 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 NSUN6Q8TEA1 469 aaKnown RBP10.08□□□□□ -0.8
PRDM9-201ENST00000296682 EDEM3Q9BZQ6 932 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 AMACRQ9UHK6 382 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 PRDM4Q9UKN5 801 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 AMFRQ9UKV5 643 aa10.08□□□□□ -0.8
PRDM9-201ENST00000296682 COL4A5P29400 1685 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 ANKRD63C9JTQ0 380 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 HSF2BPO75031 334 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 RNF40O75150 1001 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 CCNE2O96020 404 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 CNGA1P29973 690 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 GABPB1Q06547 395 aaPredicted RBP10.07□□□□□ -0.8
PRDM9-201ENST00000296682 PPP3CAQ08209 521 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 IFI16Q16666 785 aaKnown RBP10.07□□□□□ -0.8
PRDM9-201ENST00000296682 CFAP58Q5T655 872 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 PAPD7Q5XG87 772 aaKnown RBP10.07□□□□□ -0.8
PRDM9-201ENST00000296682 DHX37Q8IY37 1157 aaKnown RBP10.07□□□□□ -0.8
PRDM9-201ENST00000296682 RPUSD2Q8IZ73 545 aaKnown RBP10.07□□□□□ -0.8
PRDM9-201ENST00000296682 LPAR1Q92633 364 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 CELF4Q9BZC1 486 aaKnown RBP10.07□□□□□ -0.8
PRDM9-201ENST00000296682 SLC38A10Q9HBR0 1119 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 TBC1D22BQ9NU19 505 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 L1RE1Q9UN81 338 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 STK24Q9Y6E0 443 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 SSU72P8A0A1W2PR75 194 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 ADM5C9JUS6 153 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 PIK3CDO00329 1044 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 FGGP02679 453 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 CYP3A4P08684 503 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 FERP16591 822 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 CD58P19256 250 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 MCM3P25205 808 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 FSTL1Q12841 308 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 STRN3Q13033 797 aa10.07□□□□□ -0.8
PRDM9-201ENST00000296682 PPP2R5CQ13362 524 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms