RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 PRELID2Q8N945 189 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 HAS1Q92839 578 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 ARHGEF3Q9NR81 526 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 ALS2Q96Q42 1657 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 KDM3AQ9Y4C1 1321 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 CHRNA3P32297 505 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 CDK8P49336 464 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 CACNA1SQ13698 1873 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 CTTNQ14247 550 aaKnown RBP11.05□□□□□ -0.64
LMX1A-201ENST00000294816 SETDB1Q15047 1291 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 PALB2Q86YC2 1186 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 ERP27Q96DN0 273 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 NUDCD1Q96RS6 583 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 CDC42EP4Q9H3Q1 356 aaKnown RBP11.05□□□□□ -0.64
LMX1A-201ENST00000294816 BCAS3Q9H6U6 928 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 BSDC1Q9NW68 430 aaPredicted RBP11.05□□□□□ -0.64
LMX1A-201ENST00000294816 HAO1Q9UJM8 370 aa11.05□□□□□ -0.64
LMX1A-201ENST00000294816 TCRBV7S2A1N4TA0A589 114 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 RSPH10B2B2RC85 870 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 BAG3O95817 575 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 TMEM253P0C7T8 217 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 RSPH10BP0C881 870 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 RFC4P35249 363 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 SOX5P35711 763 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 CYP4A11Q02928 519 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 ICA1Q05084 483 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 KCNA1Q09470 495 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 GALNTL6Q49A17 601 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 RDH13Q8NBN7 331 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 TBC1D16Q8TBP0 767 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 PITPNM3Q9BZ71 974 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 PPP1R12CQ9BZL4 782 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 PCDHA2Q9Y5H9 948 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 SLIT2O94813 1529 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 A0A1W2PRG0 241 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 SPDYE5A6NIY4 337 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 PODXLO00592 558 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 SPOPO43791 374 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 CAMTA2O94983 1202 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 RPL13P26373 211 aaKnown RBP11.04□□□□□ -0.64
LMX1A-201ENST00000294816 SLC16A2P36021 539 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 PTGIRP43119 386 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 NPEPPSP55786 919 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 INHBEP58166 350 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 LONP2Q86WA8 852 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 RUNDC3BQ96NL0 473 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 DHX36Q9H2U1 1008 aaKnown RBP11.04□□□□□ -0.64
LMX1A-201ENST00000294816 CCDC134Q9H6E4 229 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 ZNF287Q9HBT7 754 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 SIX2Q9NPC8 291 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 ETAA1Q9NY74 926 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 CNOT7Q9UIV1 285 aaKnown RBP11.04□□□□□ -0.64
LMX1A-201ENST00000294816 PASKQ96RG2 1323 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 ARAP2Q8WZ64 1704 aa11.04□□□□□ -0.64
LMX1A-201ENST00000294816 GSTTP1A0A1W2PQM5 241 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 ATMINO43313 823 aaPredicted RBP11.03□□□□□ -0.64
LMX1A-201ENST00000294816 TBCAO75347 108 aaKnown RBP11.03□□□□□ -0.64
LMX1A-201ENST00000294816 MED24O75448 989 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 TRIM49P0CI25 452 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 TRIM49CP0CI26 452 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 RARGP13631 454 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 RWDD2BP57060 319 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 PSMC6P62333 389 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 ORC2Q13416 577 aaPredicted RBP11.03□□□□□ -0.64
LMX1A-201ENST00000294816 KYNUQ16719 465 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 MUM1Q2TAK8 710 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 BTNL9Q6UXG8 535 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 SLC35C1Q96A29 364 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 MRRFQ96E11 262 aaKnown RBP11.03□□□□□ -0.64
LMX1A-201ENST00000294816 MTUS1Q9ULD2 1270 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 INTUQ9ULD6 942 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 COG5Q9UP83 839 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 DIS3Q9Y2L1 958 aaKnown RBP11.03□□□□□ -0.64
LMX1A-201ENST00000294816 SYNGAP1Q96PV0 1343 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 NUP98P52948 1817 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 THAP12O43422 761 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 EDIL3O43854 480 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 CYP2J2P51589 502 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 CCDC6Q16204 474 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 TMEM154Q6P9G4 183 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 VSTM1Q6UX27 236 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 ECHDC2Q86YB7 292 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 TEKT4Q8WW24 435 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 C1orf54Q8WWF1 131 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 REEP2Q9BRK0 252 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 TXLNGQ9NUQ3 528 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 TTC7AQ9ULT0 858 aaPredicted RBP11.03□□□□□ -0.64
LMX1A-201ENST00000294816 OAS1P00973 400 aaKnown RBP11.03□□□□□ -0.64
LMX1A-201ENST00000294816 VCAM1P19320 739 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 ATP5DP30049 168 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 POLE2P56282 527 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 ARSHQ5FYA8 562 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 CADPS2Q86UW7 1296 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 FAM186BQ8IYM0 893 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 CKAP2Q8WWK9 683 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 BTBD6Q96KE9 485 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 ZCWPW1Q9H0M4 648 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 MYLK2Q9H1R3 596 aa11.03□□□□□ -0.64
LMX1A-201ENST00000294816 METTL14Q9HCE5 456 aaKnown RBP11.03□□□□□ -0.64
LMX1A-201ENST00000294816 PAPOLBQ9NRJ5 636 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms