RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 ABCB11O95342 1321 aa12.74□□□□□ -0.37
SYNGAP1-201ENST00000293748 FOXN1O15353 648 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 ECEL1O95672 775 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 CCNE1P24864 410 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 GARSP41250 739 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 ANKRD20A4Q4UJ75 823 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 ANKRD20A8PQ5CZ79 823 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 ANKRD20A2Q5SQ80 823 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 ANKRD20A1Q5TYW2 823 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 OTUD6AQ7L8S5 288 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 ZNF296Q8WUU4 475 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 SDCCAG3Q96C92 435 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 FMO2Q99518 471 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 MAP3K7O43318 606 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 MFAP3LO75121 409 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 GOLGA8HP0CJ92 632 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 KRT3P12035 628 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 KRT81Q14533 505 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 MESDQ14696 234 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 FAM133BQ5BKY9 247 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 C6orf118Q5T5N4 469 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 CLEC17AQ6ZS10 378 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 PSTPIP2Q9H939 334 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 ANGPTL2Q9UKU9 493 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 NAV1Q8NEY1 1877 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 DDX39AO00148 427 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 ADCY2Q08462 1091 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 RRP1BQ14684 758 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 GRM4Q14833 912 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 LARP4BQ92615 738 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 ANKS1AQ92625 1134 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 MAP3K14Q99558 947 aa12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 NHEJ1Q9H9Q4 299 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-201ENST00000293748 ANO9A1A5B4 782 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 hCG_1984214I3L0E3 225 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 RNF8O76064 485 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 HSPA8P11142 646 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 MYCLP12524 364 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 SLC16A2P36021 539 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 YWHAGP61981 247 aaKnown RBP eCLIP12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 CDC37Q16543 378 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 USH1GQ495M9 461 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 ZNF713Q8N859 430 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 EPS15L1Q9UBC2 864 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 STK17AQ9UEE5 414 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 SLC15A5A6NIM6 579 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 STAM2O75886 525 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 TTC4O95801 387 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 PDHBP11177 359 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 IFNAR1P17181 557 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 EIF4A3P38919 411 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 TRIM6Q9C030 488 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 PRR12Q9ULL5 1215 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 PFASO15067 1338 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 ADAMTSL1Q8N6G6 1762 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 SPDYE16A6NNV3 312 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 PLA2G6O60733 806 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 GPC4O75487 556 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 NR2F2P24468 414 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 POLE2P56282 527 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 PPP1R2P3Q6NXS1 205 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 PDZD4Q76G19 769 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 CYB5R4Q7L1T6 521 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 EFHD1Q9BUP0 239 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 SRPRBQ9Y5M8 271 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 PRPF6O94906 941 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 LMNAP02545 664 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 KRT19P08727 400 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 ATP1A3P13637 1013 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 CYP2B6P20813 491 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 PTK2Q05397 1052 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 RCN2Q14257 317 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 SAAL1Q96ER3 474 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 TSC22D3Q99576 134 aa12.72□□□□□ -0.37
SYNGAP1-201ENST00000293748 DOCK2Q92608 1830 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 A0A087WWV3 80 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 IGKV6D-41A0A0C4DH26 115 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 AFPP02771 609 aaKnown RBP12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 GUCY1A2P33402 732 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 TAF12Q16514 161 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 KMT5BQ4FZB7 885 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 EEF2KMTQ96G04 330 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 ZIC5Q96T25 663 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 FTOQ9C0B1 505 aaKnown RBP eCLIP12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 ST7Q9NRC1 585 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 FGFR1OP2Q9NVK5 253 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 DDX25Q9UHL0 483 aaKnown RBP12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 MYH1P12882 1939 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 ASB14A6NK59 587 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 VWA5AO00534 786 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 MOCS3O95396 460 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 MMP1P03956 469 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 SERPING1P05155 500 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 PDCLQ13371 301 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 SGO2Q562F6 1265 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 MAP7D3Q8IWC1 876 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 SMYD4Q8IYR2 804 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms