RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 MARCH6O60337 910 aa28.21■■■□□ 2.11
U2AF1-201ENST00000291552 RFC5P40937 340 aa28.21■■■□□ 2.11
U2AF1-201ENST00000291552 EMC2Q15006 297 aa28.21■■■□□ 2.11
U2AF1-201ENST00000291552 CDCA3Q99618 268 aaPredicted RBP28.21■■■□□ 2.11
U2AF1-201ENST00000291552 XPNPEP1Q9NQW7 623 aa28.21■■■□□ 2.11
U2AF1-201ENST00000291552 AGPAT5Q9NUQ2 364 aa28.21■■■□□ 2.11
U2AF1-201ENST00000291552 FAM105AQ9NUU6 356 aa28.21■■■□□ 2.11
U2AF1-201ENST00000291552 MUC6Q6W4X9 2439 aa28.21■■■□□ 2.11
U2AF1-201ENST00000291552 ALADP13716 330 aa28.2■■■□□ 2.1
U2AF1-201ENST00000291552 LAMTOR4Q0VGL1 99 aa28.2■■■□□ 2.1
U2AF1-201ENST00000291552 TMEM173Q86WV6 379 aaPredicted RBP28.2■■■□□ 2.1
U2AF1-201ENST00000291552 PSPC1Q8WXF1 523 aaKnown RBP28.2■■■□□ 2.1
U2AF1-201ENST00000291552 MRPL9Q9BYD2 267 aaKnown RBP28.2■■■□□ 2.1
U2AF1-201ENST00000291552 ZSWIM4Q9H7M6 989 aa28.2■■■□□ 2.1
U2AF1-201ENST00000291552 ENTPD7Q9NQZ7 604 aa28.2■■■□□ 2.1
U2AF1-201ENST00000291552 ZNF318Q5VUA4 2279 aa28.2■■■□□ 2.1
U2AF1-201ENST00000291552 NT5C1B-RDH14C9J2C7 533 aa28.19■■■□□ 2.1
U2AF1-201ENST00000291552 SLITRK3O94933 977 aa28.19■■■□□ 2.1
U2AF1-201ENST00000291552 BCAR1P56945 870 aa28.19■■■□□ 2.1
U2AF1-201ENST00000291552 XKR9Q5GH70 373 aa28.19■■■□□ 2.1
U2AF1-201ENST00000291552 POP1Q99575 1024 aaKnown RBP28.19■■■□□ 2.1
U2AF1-201ENST00000291552 EIF2AK1Q9BQI3 630 aaKnown RBP28.19■■■□□ 2.1
U2AF1-201ENST00000291552 PUF60Q9UHX1 559 aaKnown RBP28.19■■■□□ 2.1
U2AF1-201ENST00000291552 B4GALT3O60512 393 aa28.18■■■□□ 2.1
U2AF1-201ENST00000291552 ZNF623O75123 536 aa28.18■■■□□ 2.1
U2AF1-201ENST00000291552 BAG4O95429 457 aaKnown RBP28.18■■■□□ 2.1
U2AF1-201ENST00000291552 SRGAP2CP0DJJ0 459 aa28.18■■■□□ 2.1
U2AF1-201ENST00000291552 CALCRLQ16602 461 aa28.18■■■□□ 2.1
U2AF1-201ENST00000291552 HSD17B14Q9BPX1 270 aa28.18■■■□□ 2.1
U2AF1-201ENST00000291552 NGRNQ9NPE2 291 aaKnown RBP28.18■■■□□ 2.1
U2AF1-201ENST00000291552 TBC1D13Q9NVG8 400 aa28.18■■■□□ 2.1
U2AF1-201ENST00000291552 PRR33A8MZF0 331 aa28.17■■■□□ 2.1
U2AF1-201ENST00000291552 LYPLA2O95372 231 aa28.17■■■□□ 2.1
U2AF1-201ENST00000291552 HOXA11P31270 313 aaPredicted RBP28.17■■■□□ 2.1
U2AF1-201ENST00000291552 RAB27AP51159 221 aa28.17■■■□□ 2.1
U2AF1-201ENST00000291552 UBXN11Q5T124 520 aa28.17■■■□□ 2.1
U2AF1-201ENST00000291552 TMEM184AQ6ZMB5 413 aa28.17■■■□□ 2.1
U2AF1-201ENST00000291552 SRGAP1Q7Z6B7 1085 aa28.17■■■□□ 2.1
U2AF1-201ENST00000291552 FERMT3Q86UX7 667 aa28.17■■■□□ 2.1
U2AF1-201ENST00000291552 TPH2Q8IWU9 490 aa28.17■■■□□ 2.1
U2AF1-201ENST00000291552 BCL7CQ8WUZ0 217 aaPredicted RBP28.17■■■□□ 2.1
U2AF1-201ENST00000291552 SUSD6Q92537 303 aa28.17■■■□□ 2.1
U2AF1-201ENST00000291552 MTMR9Q96QG7 549 aa28.17■■■□□ 2.1
U2AF1-201ENST00000291552 MUTYHQ9UIF7 546 aa28.17■■■□□ 2.1
U2AF1-201ENST00000291552 LOC730098B7Z3J9 87 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 GAS2O43903 313 aaKnown RBP28.16■■■□□ 2.1
U2AF1-201ENST00000291552 NEMFO60524 1076 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 OFD1O75665 1012 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 SKIP12755 728 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 PLA2G5P39877 138 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 KRT17Q04695 432 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 SYCE2Q6PIF2 218 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 OTUD6AQ7L8S5 288 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 TMC7Q7Z402 723 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 RNF135Q8IUD6 432 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 EXOC8Q8IYI6 725 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 TMEM60Q9H2L4 133 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 NRDE2Q9H7Z3 1164 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 PCDHA12Q9UN75 941 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 INPP5FQ9Y2H2 1132 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 PCDHB2Q9Y5E7 798 aa28.16■■■□□ 2.1
U2AF1-201ENST00000291552 FSD2A1L4K1 749 aa28.15■■■□□ 2.1
U2AF1-201ENST00000291552 C2orf71A6NGG8 1288 aa28.15■■■□□ 2.1
U2AF1-201ENST00000291552 ZC3H11AO75152 810 aaKnown RBP eCLIP28.15■■■□□ 2.1
U2AF1-201ENST00000291552 NOMO2Q5JPE7 1267 aa28.15■■■□□ 2.1
U2AF1-201ENST00000291552 ANKRD54Q6NXT1 300 aa28.15■■■□□ 2.1
U2AF1-201ENST00000291552 LLGL2Q6P1M3 1020 aa28.15■■■□□ 2.1
U2AF1-201ENST00000291552 GLB1LQ6UWU2 654 aa28.15■■■□□ 2.1
U2AF1-201ENST00000291552 AGMOQ6ZNB7 445 aa28.15■■■□□ 2.1
U2AF1-201ENST00000291552 RNF149Q8NC42 400 aa28.15■■■□□ 2.1
U2AF1-201ENST00000291552 MTRQ99707 1265 aa28.15■■■□□ 2.1
U2AF1-201ENST00000291552 S1PR5Q9H228 398 aa28.15■■■□□ 2.1
U2AF1-201ENST00000291552 TTC12Q9H892 705 aaPredicted RBP28.15■■■□□ 2.1
U2AF1-201ENST00000291552 AFF1P51825 1210 aaKnown RBP28.14■■■□□ 2.1
U2AF1-201ENST00000291552 GUCY1B3Q02153 619 aa28.14■■■□□ 2.1
U2AF1-201ENST00000291552 HERC4Q5GLZ8 1057 aaPredicted RBP28.14■■■□□ 2.1
U2AF1-201ENST00000291552 MRPL10Q7Z7H8 261 aaKnown RBP28.14■■■□□ 2.1
U2AF1-201ENST00000291552 ASAP3Q8TDY4 903 aa28.14■■■□□ 2.1
U2AF1-201ENST00000291552 TCP11Q8WWU5 503 aa28.14■■■□□ 2.1
U2AF1-201ENST00000291552 RSPH1Q8WYR4 309 aa28.14■■■□□ 2.1
U2AF1-201ENST00000291552 DNAJB4Q9UDY4 337 aa28.14■■■□□ 2.1
U2AF1-201ENST00000291552 TDRD15B5MCY1 1934 aaKnown RBP28.14■■■□□ 2.09
U2AF1-201ENST00000291552 TECP42680 631 aa28.13■■■□□ 2.09
U2AF1-201ENST00000291552 TXKP42681 527 aa28.13■■■□□ 2.09
U2AF1-201ENST00000291552 ALDH7A1P49419 539 aaKnown RBP28.13■■■□□ 2.09
U2AF1-201ENST00000291552 TRIM29Q14134 588 aa28.13■■■□□ 2.09
U2AF1-201ENST00000291552 SMC1AQ14683 1233 aaKnown RBP28.13■■■□□ 2.09
U2AF1-201ENST00000291552 CBX2Q14781 532 aaPredicted RBP28.13■■■□□ 2.09
U2AF1-201ENST00000291552 MRPL43Q8N983 215 aaKnown RBP28.13■■■□□ 2.09
U2AF1-201ENST00000291552 VN1R3Q9BXE9 311 aa28.13■■■□□ 2.09
U2AF1-201ENST00000291552 ZBP1Q9H171 429 aa28.13■■■□□ 2.09
U2AF1-201ENST00000291552 HCN4Q9Y3Q4 1203 aa28.13■■■□□ 2.09
U2AF1-201ENST00000291552 POTEMA6NI47 508 aa28.12■■■□□ 2.09
U2AF1-201ENST00000291552 ASAP2O43150 1006 aa28.12■■■□□ 2.09
U2AF1-201ENST00000291552 GALTP07902 379 aa28.12■■■□□ 2.09
U2AF1-201ENST00000291552 SLC11A1P49279 550 aa28.12■■■□□ 2.09
U2AF1-201ENST00000291552 ZNF280BQ86YH2 543 aa28.12■■■□□ 2.09
U2AF1-201ENST00000291552 CCDC83Q8IWF9 413 aa28.12■■■□□ 2.09
U2AF1-201ENST00000291552 PIAS4Q8N2W9 510 aaPredicted RBP28.12■■■□□ 2.09
U2AF1-201ENST00000291552 AUTS2Q8WXX7 1259 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms