RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 XPNPEP1Q9NQW7 623 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 TLR9Q9NR96 1032 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 SH2B1Q9NRF2 756 aaPredicted RBP11.68□□□□□ -0.54
SNF8-201ENST00000290330 FAM105AQ9NUU6 356 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 LZTS1Q9Y250 596 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 NCOR1O75376 2440 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 ATG2AQ2TAZ0 1938 aa11.68□□□□□ -0.54
SNF8-201ENST00000290330 POTEMA6NI47 508 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 FSCN2O14926 492 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 ASAP2O43150 1006 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 ZNF623O75123 536 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 SKIP12755 728 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 PBX3P40426 434 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 HMGN5P82970 282 aaKnown RBP11.67□□□□□ -0.54
SNF8-201ENST00000290330 CLUL1Q15846 466 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 RNF149Q8NC42 400 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 FBXO18Q8NFZ0 1043 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 ZNF558Q96NG5 402 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 MTRQ99707 1265 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 FOXP1Q9H334 677 aaPredicted RBP11.67□□□□□ -0.54
SNF8-201ENST00000290330 ANKEF1Q9NU02 776 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 AGPAT5Q9NUQ2 364 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 CLEC1BQ9P126 229 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 PUF60Q9UHX1 559 aaKnown RBP11.67□□□□□ -0.54
SNF8-201ENST00000290330 FAM50BQ9Y247 325 aa11.67□□□□□ -0.54
SNF8-201ENST00000290330 A0A087WWV3 80 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 MEIS3P2A8K0S8 358 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 PER2O15055 1255 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 MBTPS2O43462 519 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 DGAT1O75907 488 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 GLP2RO95838 553 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 SPATA31C1P0DKV0 1188 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 XRCC6P12956 609 aaKnown RBP eCLIP11.66□□□□□ -0.541e-6■■■■■ 27.1
SNF8-201ENST00000290330 HOXA11P31270 313 aaPredicted RBP11.66□□□□□ -0.54
SNF8-201ENST00000290330 PPM1AP35813 382 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 RARRES1P49788 294 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 NDUFV1P49821 464 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 RAB27AP51159 221 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 KRT17Q04695 432 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 MXD4Q14582 209 aaPredicted RBP11.66□□□□□ -0.54
SNF8-201ENST00000290330 ZNF174Q15697 407 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 SMAD2Q15796 467 aaKnown RBP11.66□□□□□ -0.54
SNF8-201ENST00000290330 LONRF3Q496Y0 759 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 PDE12Q6L8Q7 609 aaKnown RBP11.66□□□□□ -0.54
SNF8-201ENST00000290330 FAM184AQ8NB25 1140 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 RSPH1Q8WYR4 309 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 LPPQ93052 612 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 MSLNLQ96KJ4 702 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 C1QTNF1Q9BXJ1 281 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 MRPL9Q9BYD2 267 aaKnown RBP11.66□□□□□ -0.54
SNF8-201ENST00000290330 TLE6Q9H808 572 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 SPG21Q9NZD8 308 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 PRKAG3Q9UGI9 489 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 CD207Q9UJ71 328 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 PCDHB2Q9Y5E7 798 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 PLXNA4Q9HCM2 1894 aa11.66□□□□□ -0.54
SNF8-201ENST00000290330 OFD1O75665 1012 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 EYA4O95677 639 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 SSTR3P32745 418 aaPredicted RBP11.65□□□□□ -0.54
SNF8-201ENST00000290330 TECP42680 631 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 ALDH7A1P49419 539 aaKnown RBP11.65□□□□□ -0.54
SNF8-201ENST00000290330 BCAR1P56945 870 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 PTENP60484 403 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 ZP2Q05996 745 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 POU5F1BQ06416 359 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 COASYQ13057 564 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 ORC2Q13416 577 aaPredicted RBP11.65□□□□□ -0.54
SNF8-201ENST00000290330 SMAD4Q13485 552 aaKnown RBP11.65□□□□□ -0.54
SNF8-201ENST00000290330 BECN1Q14457 450 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 DUSP6Q16828 381 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 UBXN11Q5T124 520 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 GLB1LQ6UWU2 654 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 CATSPER3Q86XQ3 398 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 IFNLR1Q8IU57 520 aaPredicted RBP11.65□□□□□ -0.54
SNF8-201ENST00000290330 ADHFE1Q8IWW8 467 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 SLC39A11Q8N1S5 342 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 PIGOQ8TEQ8 1089 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 TCF25Q9BQ70 676 aa11.65□□□□□ -0.54
SNF8-201ENST00000290330 C19orf67A6NJJ6 358 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 HIDE1A8MVS5 230 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 NT5C1B-RDH14C9J2C7 533 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 PI4K2BG5E9Z4 385 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 MED24O75448 989 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 OR52Z1P0C646 297 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 ARL2P36404 184 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 TRAPPC10P48553 1259 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 RBM10P98175 930 aaKnown RBP11.64□□□□□ -0.55
SNF8-201ENST00000290330 CAPSQ13938 189 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 KCNC3Q14003 757 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 TFDP1Q14186 410 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 RABEP1Q15276 862 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 PCBP1Q15365 356 aaKnown RBP eCLIP11.64□□□□□ -0.55
SNF8-201ENST00000290330 NOMO2Q5JPE7 1267 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 TTC38Q5R3I4 469 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 PLPP4Q5VZY2 271 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 AGMOQ6ZNB7 445 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 MRPL10Q7Z7H8 261 aaKnown RBP11.64□□□□□ -0.55
SNF8-201ENST00000290330 NOSTRINQ8IVI9 506 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 SMRP1Q8NCR6 262 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 VN1R2Q8NFZ6 395 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms