RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 LRRC4Q9HBW1 653 aa4.67□□□□□ -1.66
NCOA1-201ENST00000288599 CAPN10Q9HC96 672 aa4.67□□□□□ -1.66
NCOA1-201ENST00000288599 TXLNGQ9NUQ3 528 aa4.67□□□□□ -1.66
NCOA1-201ENST00000288599 ERBB3P21860 1342 aa4.67□□□□□ -1.66
NCOA1-201ENST00000288599 MAGEB6P1A0A0J9YX57 407 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 CHURC1-FNTBB4DL54 471 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 SPTLC2O15270 562 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 HIST1H2ABP04908 130 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 EIF2S1P05198 315 aaKnown RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 USP14P54578 494 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 STK4Q13043 487 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 CYP4A22Q5TCH4 519 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 ZNF658Q5TYW1 1059 aaPredicted RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 HIST3H2AQ7L7L0 130 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 TRIM42Q8IWZ5 723 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 HIST1H2ACQ93077 130 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 TBCDQ9BTW9 1192 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 CCDC8Q9H0W5 538 aaPredicted RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 KCNN2Q9H2S1 579 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 CDH7Q9ULB5 785 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 PCDHB15Q9Y5E8 787 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 PIK3R4Q99570 1358 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 TECPR2O15040 1411 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 CASKO14936 926 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 ZAP70P43403 619 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 PSEN1P49768 467 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 CCT4P50991 539 aaKnown RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 STAT2P52630 851 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 KCNA1Q09470 495 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 GPS1Q13098 491 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 ALFQ53S48 1182 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 DCAF17Q5H9S7 520 aaPredicted RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 TSHZ3Q63HK5 1081 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 FAM117BQ6P1L5 589 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 LRRC31Q6UY01 552 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 SRRM1Q8IYB3 904 aaKnown RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 RSAD2Q8WXG1 361 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 LRRC2Q9BYS8 371 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 GTF2A1LQ9UNN4 478 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 PCDHGB5Q9Y5G0 923 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 A0A0B4J269 797 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 GOLGA8KD6RF30 607 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 BMP15O95972 392 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 MMEP08473 750 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 TMEM191BP0C7N4 346 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 GOLGA8HP0CJ92 632 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 SCP2P22307 547 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 METAP2P50579 478 aaKnown RBP eCLIP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 PRKAA1Q13131 559 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 TUBB3Q13509 450 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 SLC10A5Q5PT55 438 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 TMEM164Q5U3C3 297 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 HHATQ5VTY9 493 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 PRR23BQ6ZRT6 265 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 RAPH1Q70E73 1250 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 MICU3Q86XE3 530 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 THNSL1Q8IYQ7 743 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 LCORLQ8N3X6 602 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 FANCBQ8NB91 859 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 TUFT1Q9NNX1 390 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 CASS4Q9NQ75 786 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 PAIP2BQ9ULR5 123 aaKnown RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 ZBTB1Q9Y2K1 713 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 NOX1Q9Y5S8 564 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 NALCNQ8IZF0 1738 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 C3P01024 1663 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 LRRC7Q96NW7 1537 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 CPSF1Q10570 1443 aaKnown RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 TESPA1A2RU30 521 aaPredicted RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 C5orf58C9J3I9 102 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 TK2O00142 265 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 NBNO60934 754 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 PIK3R1P27986 724 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 CYLC1P35663 651 aaPredicted RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 HADHAP40939 763 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 GCLCP48506 637 aaPredicted RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 SKP1P63208 163 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 SP3Q02447 781 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 CAND1Q86VP6 1230 aaKnown RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 FAM71BQ8TC56 605 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 NCLNQ969V3 563 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 SLC38A10Q9HBR0 1119 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 SAMSN1Q9NSI8 373 aaKnown RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 RNF14Q9UBS8 474 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 DNM3Q9UQ16 869 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 JAG2Q9Y219 1238 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 PCDHB4Q9Y5E5 795 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 CALUO43852 315 aaPredicted RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 BCL10O95999 233 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 HNRNPCP07910 306 aaKnown RBP eCLIP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 AP1S2P56377 157 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 ABCE1P61221 599 aaKnown RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 ERFEQ4G0M1 354 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 CYFIP1Q7L576 1253 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 SPATS2Q86XZ4 545 aaKnown RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 TRMT44Q8IYL2 757 aaKnown RBP4.66□□□□□ -1.66
NCOA1-201ENST00000288599 MMGT1Q8N4V1 131 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 MCOLN3Q8TDD5 553 aa4.66□□□□□ -1.66
NCOA1-201ENST00000288599 ULK4Q96C45 1275 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms