RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ASAP2O43150 1006 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 GAS2O43903 313 aaKnown RBP10.21□□□□□ -0.78
HMGN1-201ENST00000288344 MARCH6O60337 910 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 CSDE1O75534 798 aaKnown RBP10.21□□□□□ -0.78
HMGN1-201ENST00000288344 RPS6KA5O75582 802 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 DGAT1O75907 488 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 ATF7P17544 494 aaPredicted RBP10.21□□□□□ -0.78
HMGN1-201ENST00000288344 CYP11B2P19099 503 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 GLRA2P23416 452 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 PTENP60484 403 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 ERVK-21P61565 698 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 LAMTOR4Q0VGL1 99 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 MMRN1Q13201 1228 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 PKP1Q13835 747 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 EMC2Q15006 297 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 SF3A1Q15459 793 aaKnown RBP10.21□□□□□ -0.78
HMGN1-201ENST00000288344 SKIV2LQ15477 1246 aaKnown RBP10.21□□□□□ -0.78
HMGN1-201ENST00000288344 XKR9Q5GH70 373 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 DMRTA1Q5VZB9 504 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 DTHD1Q6ZMT9 781 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 C1orf186Q6ZWK4 172 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 USP49Q70CQ1 688 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 ZNF410Q86VK4 478 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 EXOC8Q8IYI6 725 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 DAW1Q8N136 415 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 KCTD17Q8N5Z5 321 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 ASAP3Q8TDY4 903 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 CLP1Q92989 425 aaKnown RBP10.21□□□□□ -0.78
HMGN1-201ENST00000288344 ZNF668Q96K58 619 aaPredicted RBP10.21□□□□□ -0.78
HMGN1-201ENST00000288344 JPH2Q9BR39 696 aaPredicted RBP10.21□□□□□ -0.78
HMGN1-201ENST00000288344 INSL6Q9Y581 213 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 FNDC1Q4ZHG4 1894 aaPredicted RBP10.21□□□□□ -0.78
HMGN1-201ENST00000288344 A0A0U1RQF3 1178 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 ZNF623O75123 536 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 AMHP03971 560 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 FGFR4P22455 802 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 DDIT3P35638 169 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 NASPP49321 788 aaPredicted RBP10.2□□□□□ -0.78
HMGN1-201ENST00000288344 MAPK7Q13164 816 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 SLC39A14Q15043 492 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 TMEM119Q4V9L6 283 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 UBXN11Q5T124 520 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 ZNF697Q5TEC3 545 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 SLC24A5Q71RS6 500 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 SLC7A3Q8WY07 619 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 BSNDQ8WZ55 320 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 KCNN1Q92952 543 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 PCMTD1Q96MG8 357 aaPredicted RBP10.2□□□□□ -0.78
HMGN1-201ENST00000288344 USP28Q96RU2 1077 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 MAP7D2Q96T17 732 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 ADAM2Q99965 735 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 ZSCAN16Q9H4T2 348 aaPredicted RBP10.2□□□□□ -0.78
HMGN1-201ENST00000288344 ELAC1Q9H777 363 aaKnown RBP10.2□□□□□ -0.78
HMGN1-201ENST00000288344 BLOC1S4Q9NUP1 217 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 MSRAQ9UJ68 235 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 FBXO2Q9UK22 296 aaPredicted RBP10.2□□□□□ -0.78
HMGN1-201ENST00000288344 KIAA1024Q9UPX6 916 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 AKT3Q9Y243 479 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 SRPRBQ9Y5M8 271 aaKnown RBP10.2□□□□□ -0.78
HMGN1-201ENST00000288344 COL4A3BPQ9Y5P4 624 aa10.2□□□□□ -0.78
HMGN1-201ENST00000288344 RCCD1A6NED2 376 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 PPP1R3GB7ZBB8 358 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 E9PMD0 336 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 C5orf67F2Z3F1 127 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 M0QZ92 97 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 SLC26A4O43511 780 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 TLL1O43897 1013 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 EYA4O95677 639 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 PDIA4P13667 645 aaKnown RBP10.19□□□□□ -0.78
HMGN1-201ENST00000288344 KCNJ6P48051 423 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 SARSP49591 514 aaKnown RBP10.19□□□□□ -0.78
HMGN1-201ENST00000288344 DNM2P50570 870 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 SLC12A3P55017 1021 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 NFX1Q12986 1120 aaKnown RBP10.19□□□□□ -0.78
HMGN1-201ENST00000288344 PAK2Q13177 524 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 GNL2Q13823 731 aaKnown RBP10.19□□□□□ -0.78
HMGN1-201ENST00000288344 CAPSQ13938 189 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 ARSHQ5FYA8 562 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 ADGRD1Q6QNK2 874 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 LRRC55Q6ZSA7 311 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 SRGAP1Q7Z6B7 1085 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 RHPN2Q8IUC4 686 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 NPAS4Q8IUM7 802 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 MYOCDQ8IZQ8 938 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 SYT2Q8N9I0 419 aaPredicted RBP10.19□□□□□ -0.78
HMGN1-201ENST00000288344 PSPC1Q8WXF1 523 aaKnown RBP10.19□□□□□ -0.78
HMGN1-201ENST00000288344 AK8Q96MA6 479 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 FAM161BQ96MY7 647 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 PPP1R16BQ96T49 567 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 MTRQ99707 1265 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 NTPCRQ9BSD7 190 aaKnown RBP10.19□□□□□ -0.78
HMGN1-201ENST00000288344 GCOM2Q9BZD3 368 aaPredicted RBP10.19□□□□□ -0.78
HMGN1-201ENST00000288344 CCSER1Q9C0I3 900 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 FZD8Q9H461 694 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 SLC28A3Q9HAS3 691 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 GPRC5CQ9NQ84 441 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 CHST12Q9NRB3 414 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 GINS2Q9Y248 185 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 BRWD1Q9NSI6 2320 aa10.19□□□□□ -0.78
HMGN1-201ENST00000288344 C5orf42Q9H799 3197 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms