RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 CIITAP33076 1130 aa12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 ADD1P35611 737 aaKnown RBP12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 SLC11A1P49279 550 aa12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 RNASELQ05823 741 aaKnown RBP12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 MTERF2Q49AM1 385 aa12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 NOMO2Q5JPE7 1267 aa12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 GLB1LQ6UWU2 654 aa12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 DHX32Q7L7V1 743 aaKnown RBP12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 PPFIBP1Q86W92 1011 aa12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 DTWD2Q8NBA8 298 aa12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 GJA10Q969M2 543 aa12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 SH2D3AQ9BRG2 576 aa12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 FDXACB1Q9BRP7 624 aaPredicted RBP12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 C6orf50Q9HD87 102 aa12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 CHST12Q9NRB3 414 aa12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 MYH9P35579 1960 aaKnown RBP12.1□□□□□ -0.47
NSMCE2-201ENST00000287437 MSH4O15457 936 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 GAS7O60861 476 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 OFD1O75665 1012 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 CNPP09543 421 aaKnown RBP12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 KLRC2P26717 231 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 CLCN4P51793 760 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 TARBP2Q15633 366 aaKnown RBP12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 LETM2Q2VYF4 491 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 ADCK5Q3MIX3 580 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 RNF20Q5VTR2 975 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 ZNF280BQ86YH2 543 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 RSPH1Q8WYR4 309 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 KLHL5Q96PQ7 755 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 RTP3Q9BQQ7 232 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 TRAIPQ9BWF2 469 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 EMILIN2Q9BXX0 1053 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 UNC45AQ9H3U1 944 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 FAM105AQ9NUU6 356 aa12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 SEPT9Q9UHD8 586 aaPredicted RBP12.09□□□□□ -0.47
NSMCE2-201ENST00000287437 GVINP1Q7Z2Y8 2422 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 CARNS1A5YM72 827 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 EDIL3O43854 480 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 N4BP1O75113 896 aaKnown RBP12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 CFHP08603 1231 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 SKIP12755 728 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 AFF1P51825 1210 aaKnown RBP12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 JAK3P52333 1124 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 LRCH2Q5VUJ6 765 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 KSR1Q8IVT5 923 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 RASEFQ8IZ41 740 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 KCNG4Q8TDN1 519 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 CCDC12Q8WUD4 166 aaPredicted RBP12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 RSAD2Q8WXG1 361 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 CCDC136Q96JN2 1154 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 CEP89Q96ST8 783 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 RIT2Q99578 217 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 TEKT3Q9BXF9 490 aa12.08□□□□□ -0.48
NSMCE2-201ENST00000287437 DMXL1Q9Y485 3027 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 IGKV6-21A0A0C4DH24 114 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 KRBA1A5PL33 1030 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 STK25O00506 426 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 C2CD2LO14523 706 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 ZNF623O75123 536 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 DDHD2O94830 711 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 STBD1O95210 358 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 MYBP10242 640 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 GNA11P29992 359 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 SFNP31947 248 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 GBP2P32456 591 aaPredicted RBP12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 DNM2P50570 870 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 RAB27AP51159 221 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 RCAN1P53805 252 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 CDC42EP1Q00587 391 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 AGMOQ6ZNB7 445 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 C15orf39Q6ZRI6 1047 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 CATSPER4Q7RTX7 472 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 MIER3Q7Z3K6 550 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 ZNF410Q86VK4 478 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 RHPN2Q8IUC4 686 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 RIN2Q8WYP3 895 aaPredicted RBP12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 SLC5A5Q92911 643 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 PHKBQ93100 1093 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 NLRP4Q96MN2 994 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 NIFKQ9BYG3 293 aaKnown RBP12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 INO80BQ9C086 356 aaPredicted RBP12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 MAN1C1Q9NR34 630 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 MRPL17Q9NRX2 175 aaKnown RBP12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 IGSF9Q9P2J2 1179 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 SUCLA2Q9P2R7 463 aaPredicted RBP12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 PCDHB2Q9Y5E7 798 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 R4GN57 208 aa12.07□□□□□ -0.48
NSMCE2-201ENST00000287437 CCDC196A0A1B0GTZ2 297 aa12.06□□□□□ -0.48
NSMCE2-201ENST00000287437 LILRB3O75022 631 aa12.06□□□□□ -0.48
NSMCE2-201ENST00000287437 LMNAP02545 664 aaKnown RBP12.06□□□□□ -0.48
NSMCE2-201ENST00000287437 CPA1P15085 419 aa12.06□□□□□ -0.48
NSMCE2-201ENST00000287437 RFX1P22670 979 aa12.06□□□□□ -0.48
NSMCE2-201ENST00000287437 AK2P54819 239 aa12.06□□□□□ -0.48
NSMCE2-201ENST00000287437 FGD1P98174 961 aa12.06□□□□□ -0.48
NSMCE2-201ENST00000287437 XKR3Q5GH77 459 aa12.06□□□□□ -0.48
NSMCE2-201ENST00000287437 URGCPQ8TCY9 931 aa12.06□□□□□ -0.48
NSMCE2-201ENST00000287437 RMDN1Q96DB5 314 aa12.06□□□□□ -0.48
NSMCE2-201ENST00000287437 PGBD4Q96DM1 585 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms