RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 TMEM40Q8WWA1 233 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 ABHD8Q96I13 439 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 NFKBIZQ9BYH8 718 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 GINS2Q9Y248 185 aa24.02■■□□□ 1.44
PDLIM3-203ENST00000284771 CHRNA1P02708 482 aa24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 EDN1P05305 212 aa24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 THPOP40225 353 aa24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 TLE2Q04725 743 aa24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 FAAP100Q0VG06 881 aa24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 TFDP1Q14186 410 aa24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 BMT2Q1RMZ1 405 aa24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 IFNLR1Q8IU57 520 aaPredicted RBP24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 GUF1Q8N442 669 aaKnown RBP24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 DEPTORQ8TB45 409 aa24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 NLRP7Q8WX94 980 aa24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 OSBPL7Q9BZF2 842 aa24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 KCNG1Q9UIX4 513 aa24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 USP20Q9Y2K6 914 aa24.01■■□□□ 1.43
PDLIM3-203ENST00000284771 PMS1P54277 932 aaKnown RBP24■■□□□ 1.43
PDLIM3-203ENST00000284771 ZNF410Q86VK4 478 aa24■■□□□ 1.43
PDLIM3-203ENST00000284771 NELFCDQ8IXH7 590 aa24■■□□□ 1.43
PDLIM3-203ENST00000284771 MYOCDQ8IZQ8 938 aa24■■□□□ 1.43
PDLIM3-203ENST00000284771 TOX2Q96NM4 488 aa24■■□□□ 1.43
PDLIM3-203ENST00000284771 OSMRQ99650 979 aa24■■□□□ 1.43
PDLIM3-203ENST00000284771 CCDC113Q9H0I3 377 aa24■■□□□ 1.43
PDLIM3-203ENST00000284771 TBX20Q9UMR3 447 aa24■■□□□ 1.43
PDLIM3-203ENST00000284771 PCDHB13Q9Y5F0 798 aa24■■□□□ 1.43
PDLIM3-203ENST00000284771 MROH7Q68CQ1 1323 aa24■■□□□ 1.43
PDLIM3-203ENST00000284771 TTLL13PA6NNM8 815 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 EIF3DO15371 548 aaKnown RBP eCLIP23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 CTSHP09668 335 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 MRPS6P82932 125 aaKnown RBP23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 CDC42EP1Q00587 391 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 MBTD1Q05BQ5 628 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 MGAT3Q09327 533 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 TRAF7Q6Q0C0 670 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 GAS2L3Q86XJ1 694 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 SLC17A8Q8NDX2 589 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 CELF4Q9BZC1 486 aaKnown RBP23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 SEMA6BQ9H3T3 888 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 TMEM134Q9H6X4 195 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 SIP14410 1827 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 K7ERI5 159 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 CKBP12277 381 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 L1TD1Q5T7N2 865 aaKnown RBP23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 ZNF618Q5T7W0 954 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 KLHL10Q6JEL2 608 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 RSPH3Q86UC2 560 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 GTPBP4Q9BZE4 634 aaKnown RBP23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 KCTD10Q9H3F6 313 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 FZD8Q9H461 694 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 CDY2AQ9Y6F7 541 aa23.99■■□□□ 1.43
PDLIM3-203ENST00000284771 ZMYM2Q9UBW7 1377 aa23.98■■□□□ 1.43
PDLIM3-203ENST00000284771 TGFB1I1O43294 461 aa23.98■■□□□ 1.43
PDLIM3-203ENST00000284771 KNOP1Q1ED39 458 aaKnown RBP23.98■■□□□ 1.43
PDLIM3-203ENST00000284771 MAP4K3Q8IVH8 894 aa23.98■■□□□ 1.43
PDLIM3-203ENST00000284771 ATP11BQ9Y2G3 1177 aa23.98■■□□□ 1.43
PDLIM3-203ENST00000284771 DARSP14868 501 aaKnown RBP23.97■■□□□ 1.43
PDLIM3-203ENST00000284771 EIF4BP23588 611 aaKnown RBP23.97■■□□□ 1.43
PDLIM3-203ENST00000284771 PHKA2P46019 1235 aa23.97■■□□□ 1.43
PDLIM3-203ENST00000284771 EFNA5P52803 228 aa23.97■■□□□ 1.43
PDLIM3-203ENST00000284771 CRYBB1P53674 252 aaPredicted RBP23.97■■□□□ 1.43
PDLIM3-203ENST00000284771 CENPPQ6IPU0 288 aa23.97■■□□□ 1.43
PDLIM3-203ENST00000284771 SCLT1Q96NL6 688 aa23.97■■□□□ 1.43
PDLIM3-203ENST00000284771 C2orf40Q9H1Z8 148 aa23.97■■□□□ 1.43
PDLIM3-203ENST00000284771 TRIM49BA6NDI0 452 aa23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 DCDC2CA8MYV0 355 aa23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 TISP43B9A030 160 aa23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 INO80B-WBP1J3KQ70 363 aa23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 FGFR4P22455 802 aa23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 RBL2Q08999 1139 aa23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 ALCAMQ13740 583 aa23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 AMHR2Q16671 573 aa23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 FAM26DQ5JW98 314 aa23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 ZBTB8OSQ8IWT0 167 aa23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 DHTKD1Q96HY7 919 aaPredicted RBP23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 INO80BQ9C086 356 aaPredicted RBP23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 TRPV2Q9Y5S1 764 aa23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 UMODL1Q5DID0 1318 aa23.96■■□□□ 1.43
PDLIM3-203ENST00000284771 H0YCG3 227 aa23.95■■□□□ 1.43
PDLIM3-203ENST00000284771 RPLP2P05387 115 aaKnown RBP23.95■■□□□ 1.43
PDLIM3-203ENST00000284771 STX17P56962 302 aa23.95■■□□□ 1.43
PDLIM3-203ENST00000284771 SRGAP1Q7Z6B7 1085 aa23.95■■□□□ 1.43
PDLIM3-203ENST00000284771 ZNF710Q8N1W2 664 aa23.95■■□□□ 1.43
PDLIM3-203ENST00000284771 NELFBQ8WX92 580 aa23.95■■□□□ 1.43
PDLIM3-203ENST00000284771 ANP32EQ9BTT0 268 aa23.95■■□□□ 1.43
PDLIM3-203ENST00000284771 GCOM2Q9BZD3 368 aaPredicted RBP23.95■■□□□ 1.43
PDLIM3-203ENST00000284771 TSPY26PQ9H489 355 aa23.95■■□□□ 1.43
PDLIM3-203ENST00000284771 CTNND2Q9UQB3 1225 aa23.95■■□□□ 1.43
PDLIM3-203ENST00000284771 PHLPP2Q6ZVD8 1323 aa23.95■■□□□ 1.42
PDLIM3-203ENST00000284771 B4GALT5O43286 388 aa23.95■■□□□ 1.42
PDLIM3-203ENST00000284771 MBTPS1Q14703 1052 aa23.95■■□□□ 1.42
PDLIM3-203ENST00000284771 MAPK6Q16659 721 aa23.95■■□□□ 1.42
PDLIM3-203ENST00000284771 ZCWPW2Q504Y3 356 aa23.95■■□□□ 1.42
PDLIM3-203ENST00000284771 ANKRD40Q6AI12 368 aa23.95■■□□□ 1.42
PDLIM3-203ENST00000284771 SLC39A4Q6P5W5 647 aa23.95■■□□□ 1.42
PDLIM3-203ENST00000284771 STXBP4Q6ZWJ1 553 aa23.95■■□□□ 1.42
PDLIM3-203ENST00000284771 CAGE1Q8TC20 777 aa23.95■■□□□ 1.42
PDLIM3-203ENST00000284771 HVCN1Q96D96 273 aa23.95■■□□□ 1.42
PDLIM3-203ENST00000284771 ACCSQ96QU6 501 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms