RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 UBE4BO95155 1302 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SORBS3O60504 671 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 JAK2O60674 1132 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ZRANB2O95218 330 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 NR3C1P04150 777 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 CLTAP09496 248 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 PDIA3P30101 505 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ADD1P35611 737 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 MKRN3Q13064 507 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 LAMC2Q13753 1193 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 TAF1CQ15572 869 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ARHGAP15Q53QZ3 475 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ALKBH5Q6P6C2 394 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 TTC30AQ86WT1 665 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 NT5DC4Q86YG4 428 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 CCDC24Q8N4L8 307 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 KCTD17Q8N5Z5 321 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ATP11CQ8NB49 1132 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 TDRD7Q8NHU6 1098 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 NDST4Q9H3R1 872 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 WDR35Q9P2L0 1181 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 NARFQ9UHQ1 456 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 PTPN22Q9Y2R2 807 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 PZPP20742 1482 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 IGSF1Q8N6C5 1336 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ARHGAP10A1A4S6 786 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SYCE1LA8MT33 242 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 MCF2P10911 925 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 KCNA4P22459 653 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 GPSM2P81274 684 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 KCTD1Q719H9 257 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ST13P4Q8IZP2 240 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SPATA16Q9BXB7 569 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ABCF3Q9NUQ8 709 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 FANCLQ9NW38 375 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 A2ML1A8K2U0 1454 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 DYRK3O43781 588 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SREBF2Q12772 1141 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SNAPC2Q13487 334 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 MAPRE1Q15691 268 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 EZH2Q15910 746 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ANO4Q32M45 955 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 TBC1D1Q86TI0 1168 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 CATSPER1Q8NEC5 780 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 PDCD6IPQ8WUM4 868 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 OSCP1Q8WVF1 389 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 MAP4K1Q92918 833 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 PLEKHA8Q96JA3 519 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SPATA33Q96N06 139 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 FOXP3Q9BZS1 431 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SYTL2Q9HCH5 934 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 NSMCE4AQ9NXX6 385 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 DOLKQ9UPQ8 538 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 CDHR2Q9BYE9 1310 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 PVALEFA0A1B0GWK0 134 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ARHGEF9O43307 516 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SPARCL1Q14515 664 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ZKSCAN8Q15776 578 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ZSCAN26Q16670 478 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SCARA5Q6ZMJ2 495 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 TAS2R42Q7RTR8 314 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 PRUNE1Q86TP1 453 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 CEP95Q96GE4 821 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 TACO1Q9BSH4 297 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 NUP85Q9BW27 656 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 JPH1Q9HDC5 661 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SMARCAL1Q9NZC9 954 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 HACD3Q9P035 362 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 RNF181Q9P0P0 153 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 CEP72Q9P209 647 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 STAP2Q9UGK3 403 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ATP8A1Q9Y2Q0 1164 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 PCDHA5Q9Y5H7 936 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 M0QYV0 167 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 GFPT2O94808 682 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 FGGP02679 453 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 HSPA1AP0DMV8 641 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 HSPA1BP0DMV9 641 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 MMP14P50281 582 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF827Q17R98 1081 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 AARS2Q5JTZ9 985 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 TMEM270Q6UE05 265 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 UNC13DQ70J99 1090 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 FAM9CQ8IZT9 166 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 TAB3Q8N5C8 712 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 TEX9Q8N6V9 391 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 HSPH1Q92598 858 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 NHEJ1Q9H9Q4 299 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 EML4Q9HC35 981 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 NMRK1Q9NWW6 199 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 FAM32AQ9Y421 112 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SPDYE5A6NIY4 337 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 C19orf81C9J6K1 198 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 RPS6KA4O75676 772 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 DGAT1O75907 488 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ARIH2O95376 493 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 GH2P01242 217 aa4.32□□□□□ -1.72
SCN3A-201ENST00000283254 ANXA11P50995 505 aaKnown RBP4.32□□□□□ -1.72
SCN3A-201ENST00000283254 SKOR1P84550 965 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms