RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 PFKFB2O60825 505 aa14.28□□□□□ -0.12
CD44-203ENST00000278386 PPP4R3AQ6IN85 833 aa14.28□□□□□ -0.12
CD44-203ENST00000278386 DENND4AQ7Z401 1863 aa14.28□□□□□ -0.12
CD44-203ENST00000278386 ZBTB33Q86T24 672 aa14.28□□□□□ -0.12
CD44-203ENST00000278386 OXER1Q8TDS5 423 aa14.28□□□□□ -0.12
CD44-203ENST00000278386 PSPC1Q8WXF1 523 aaKnown RBP14.28□□□□□ -0.12
CD44-203ENST00000278386 RSPH1Q8WYR4 309 aa14.28□□□□□ -0.12
CD44-203ENST00000278386 WASF1Q92558 559 aa14.28□□□□□ -0.12
CD44-203ENST00000278386 TSHZ2Q9NRE2 1034 aa14.28□□□□□ -0.12
CD44-203ENST00000278386 FAM105AQ9NUU6 356 aa14.28□□□□□ -0.12
CD44-203ENST00000278386 ORC3Q9UBD5 711 aaPredicted RBP14.28□□□□□ -0.12
CD44-203ENST00000278386 TPCN1Q9ULQ1 816 aa14.28□□□□□ -0.12
CD44-203ENST00000278386 TMEM221A6NGB7 291 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 C2orf71A6NGG8 1288 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 M0R296 226 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 BAG4O95429 457 aaKnown RBP14.27□□□□□ -0.13
CD44-203ENST00000278386 P4HBP07237 508 aaKnown RBP14.27□□□□□ -0.13
CD44-203ENST00000278386 HOXB8P17481 243 aaPredicted RBP14.27□□□□□ -0.13
CD44-203ENST00000278386 KRT2P35908 639 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 RFC5P40937 340 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 KCNC3Q14003 757 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 EMC2Q15006 297 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 ANKRD1Q15327 319 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 TPRNQ4KMQ1 711 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 NOMO2Q5JPE7 1267 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 TMEM184AQ6ZMB5 413 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 TRIM67Q6ZTA4 783 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 EXOC8Q8IYI6 725 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 URGCPQ8TCY9 931 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 TMEM143Q96AN5 459 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 AGPAT5Q9NUQ2 364 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 TBC1D13Q9NVG8 400 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 WRAP73Q9P2S5 460 aaPredicted RBP14.27□□□□□ -0.13
CD44-203ENST00000278386 PPME1Q9Y570 386 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 HCFC2Q9Y5Z7 792 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 C2orf16Q68DN1 1984 aa14.27□□□□□ -0.13
CD44-203ENST00000278386 CARNS1A5YM72 827 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 FAM205CA6NFA0 338 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 MEIS3P2A8K0S8 358 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 TBX3O15119 743 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 SRGAP2CP0DJJ0 459 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 YWHABP31946 246 aaKnown RBP14.26□□□□□ -0.13
CD44-203ENST00000278386 FOSBP53539 338 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 AK2P54819 239 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 ZXDAP98168 799 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 CYP4A11Q02928 519 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 NR5A1Q13285 461 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 EPHA7Q15375 998 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 XKR9Q5GH70 373 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 CES5AQ6NT32 575 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 SYCE2Q6PIF2 218 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 TMEM173Q86WV6 379 aaPredicted RBP14.26□□□□□ -0.13
CD44-203ENST00000278386 SUGP1Q8IWZ8 645 aaKnown RBP14.26□□□□□ -0.13
CD44-203ENST00000278386 VPS52Q8N1B4 723 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 ZNF579Q8NAF0 562 aaKnown RBP14.26□□□□□ -0.13
CD44-203ENST00000278386 AUTS2Q8WXX7 1259 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 HAS1Q92839 578 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 PGBD4Q96DM1 585 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 DYDC2Q96IM9 177 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 FBXL18Q96ME1 805 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 CCDC43Q96MW1 224 aaKnown RBP14.26□□□□□ -0.13
CD44-203ENST00000278386 MTRQ99707 1265 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 TRAIPQ9BWF2 469 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 ZBP1Q9H171 429 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 S1PR5Q9H228 398 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 KCNH6Q9H252 994 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 NRDE2Q9H7Z3 1164 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 IFT122Q9HBG6 1241 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 RGL1Q9NZL6 768 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 CDH22Q9UJ99 828 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 NR2E1Q9Y466 385 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 WDFY4Q6ZS81 3184 aa14.26□□□□□ -0.13
CD44-203ENST00000278386 SPDYE4A6NLX3 237 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 GAS2O43903 313 aaKnown RBP14.25□□□□□ -0.13
CD44-203ENST00000278386 CLASP2O75122 1294 aaKnown RBP14.25□□□□□ -0.13
CD44-203ENST00000278386 ERLIN2O94905 339 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 CXCL14O95715 111 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 NHLH1Q02575 133 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 LAMTOR4Q0VGL1 99 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 CTTNQ14247 550 aaKnown RBP14.25□□□□□ -0.13
CD44-203ENST00000278386 OTUD6AQ7L8S5 288 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 SRGAP1Q7Z6B7 1085 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 ALYREFQ86V81 257 aaKnown RBP14.25□□□□□ -0.13
CD44-203ENST00000278386 C4orf19Q8IY42 314 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 SLFN12Q8IYM2 578 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 MRPL43Q8N983 215 aaKnown RBP14.25□□□□□ -0.13
CD44-203ENST00000278386 RNF149Q8NC42 400 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 TCP11Q8WWU5 503 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 PRPF31Q8WWY3 499 aaKnown RBP14.25□□□□□ -0.13
CD44-203ENST00000278386 PBXIP1Q96AQ6 731 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 IGSF21Q96ID5 467 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 DHX33Q9H6R0 707 aaKnown RBP14.25□□□□□ -0.13
CD44-203ENST00000278386 RSAD1Q9HA92 442 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 DNAJB4Q9UDY4 337 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 PCDHB2Q9Y5E7 798 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 PLXNA3P51805 1871 aa14.25□□□□□ -0.13
CD44-203ENST00000278386 MYO10Q9HD67 2058 aa14.24□□□□□ -0.13
CD44-203ENST00000278386 CNTNAP2Q9UHC6 1331 aa14.24□□□□□ -0.13
CD44-203ENST00000278386 OFD1O75665 1012 aa14.24□□□□□ -0.13
CD44-203ENST00000278386 CTDNEP1O95476 244 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms