RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PARK7Q99497 189 aaKnown RBP14.05□□□□□ -0.16
C9orf3-201ENST00000277198 PACSIN1Q9BY11 444 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 SUCLA2Q9P2R7 463 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-201ENST00000277198 VAV3Q9UKW4 847 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 LOC285556D6RIA3 1793 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 UBE4BO95155 1302 aa14.05□□□□□ -0.16
C9orf3-201ENST00000277198 HMGB1P1B2RPK0 211 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-201ENST00000277198 BHMG1C9JSJ3 638 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-201ENST00000277198 F5H6K3 240 aa14.04□□□□□ -0.16
C9orf3-201ENST00000277198 PSMC6P62333 389 aa14.04□□□□□ -0.16
C9orf3-201ENST00000277198 GNGT1P63211 74 aa14.04□□□□□ -0.16
C9orf3-201ENST00000277198 LACTBP83111 547 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-201ENST00000277198 ICA1Q05084 483 aa14.04□□□□□ -0.16
C9orf3-201ENST00000277198 KLRC3Q07444 240 aa14.04□□□□□ -0.16
C9orf3-201ENST00000277198 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
C9orf3-201ENST00000277198 CCDC43Q96MW1 224 aaKnown RBP14.04□□□□□ -0.16
C9orf3-201ENST00000277198 EFCC1Q9HA90 598 aa14.04□□□□□ -0.16
C9orf3-201ENST00000277198 AS3MTQ9HBK9 375 aa14.04□□□□□ -0.16
C9orf3-201ENST00000277198 TUFT1Q9NNX1 390 aa14.04□□□□□ -0.16
C9orf3-201ENST00000277198 SEL1LQ9UBV2 794 aa14.04□□□□□ -0.16
C9orf3-201ENST00000277198 GRIN2DO15399 1336 aa14.04□□□□□ -0.16
C9orf3-201ENST00000277198 ATXN2Q99700 1313 aaKnown RBP14.04□□□□□ -0.16
C9orf3-201ENST00000277198 MYH10P35580 1976 aa14.04□□□□□ -0.16
C9orf3-201ENST00000277198 A0A087WUV0 522 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-201ENST00000277198 A0A1W2PRG0 241 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 FAM86B1E9PN63 330 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 PGRMC1O00264 195 aaKnown RBP14.03□□□□□ -0.16
C9orf3-201ENST00000277198 KCNK3O14649 394 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 MSH4O15457 936 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 H2AFZP0C0S5 128 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 FAM86B2P0C5J1 330 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 CCDC172P0C7W6 258 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 BCRP11274 1271 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 SYDE2Q5VT97 1194 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 H2AFVQ71UI9 128 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 SIAH1Q8IUQ4 282 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 RASGEF1CQ8N431 466 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 TPCN2Q8NHX9 752 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 BCAS4Q8TDM0 211 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 CASKIN2Q8WXE0 1202 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 IFT81Q8WYA0 676 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 ARL8AQ96BM9 186 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 LRRC45Q96CN5 670 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 BORCS6Q96GS4 357 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 HINFPQ9BQA5 517 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.16
C9orf3-201ENST00000277198 ASCC2Q9H1I8 757 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-201ENST00000277198 KCND2Q9NZV8 630 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 TTC7AQ9ULT0 858 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-201ENST00000277198 DIS3Q9Y2L1 958 aaKnown RBP14.03□□□□□ -0.16
C9orf3-201ENST00000277198 RABGAP1Q9Y3P9 1069 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 ASTN1O14525 1302 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 ZNF233A6NK53 670 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 RAD51CO43502 376 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 CPP00450 1065 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 ACTN1P12814 892 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 PSMC2P35998 433 aaKnown RBP14.03□□□□□ -0.16
C9orf3-201ENST00000277198 STAT1P42224 750 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 KIAA1755Q5JYT7 1200 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 FBXO46Q6PJ61 603 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-201ENST00000277198 STXBP4Q6ZWJ1 553 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 B4GALNT4Q76KP1 1039 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 GPIHBP1Q8IV16 184 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 PROCA1Q8NCQ7 364 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-201ENST00000277198 P2RX7Q99572 595 aaKnown RBP14.03□□□□□ -0.16
C9orf3-201ENST00000277198 HSD17B14Q9BPX1 270 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 EIF2AK1Q9BQI3 630 aaKnown RBP14.03□□□□□ -0.16
C9orf3-201ENST00000277198 SLITRK6Q9H5Y7 841 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 SIX2Q9NPC8 291 aa14.03□□□□□ -0.16
C9orf3-201ENST00000277198 NOP2P46087 812 aaKnown RBP14.02□□□□□ -0.16
C9orf3-201ENST00000277198 SOX10P56693 466 aa14.02□□□□□ -0.16
C9orf3-201ENST00000277198 MRPS25P82663 173 aaKnown RBP14.02□□□□□ -0.16
C9orf3-201ENST00000277198 CLUL1Q15846 466 aa14.02□□□□□ -0.16
C9orf3-201ENST00000277198 PPP2R5EQ16537 467 aa14.02□□□□□ -0.16
C9orf3-201ENST00000277198 PIK3R5Q8WYR1 880 aa14.02□□□□□ -0.16
C9orf3-201ENST00000277198 BHMT2Q9H2M3 363 aa14.02□□□□□ -0.16
C9orf3-201ENST00000277198 GCNT4Q9P109 453 aa14.02□□□□□ -0.16
C9orf3-201ENST00000277198 PTPN22Q9Y2R2 807 aa14.02□□□□□ -0.16
C9orf3-201ENST00000277198 MYH4Q9Y623 1939 aa14.02□□□□□ -0.16
C9orf3-201ENST00000277198 MEIS1O00470 390 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 GCNT3O95395 438 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 NDUFB10O96000 172 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 FAM153BP0C7A2 387 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 BMP3P12645 472 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 PSMC4P43686 418 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 FAM153CQ494X1 144 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 DCAF17Q5H9S7 520 aaPredicted RBP14.02□□□□□ -0.17
C9orf3-201ENST00000277198 RINT1Q6NUQ1 792 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 PEX26Q7Z412 305 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 MAATS1Q7Z4T9 603 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 ARFGAP2Q8N6H7 521 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 ATP6V1G3Q96LB4 118 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 STK33Q9BYT3 514 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 FAM153AQ9UHL3 310 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 PACSIN2Q9UNF0 486 aaPredicted RBP14.02□□□□□ -0.17
C9orf3-201ENST00000277198 STXBP5LQ9Y2K9 1186 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 SLC45A1Q9Y2W3 748 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 PTCH2Q9Y6C5 1203 aa14.02□□□□□ -0.17
C9orf3-201ENST00000277198 GOLGA6L10A6NI86 522 aa14.01□□□□□ -0.17
C9orf3-201ENST00000277198 TGFB1I1O43294 461 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms