RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 PTK2Q05397 1052 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 ENOX2Q16206 610 aaKnown RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 C1orf220Q5T0J3 134 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 TRAPPC11Q7Z392 1133 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 ZNF571Q7Z3V5 609 aaPredicted RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 RNF10Q8N5U6 811 aaKnown RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 TRIM58Q8NG06 486 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 LMO3Q8TAP4 145 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 SEPT1Q8WYJ6 367 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 FGD4Q96M96 766 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 PCYT2Q99447 389 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 MMP19Q99542 508 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 MPHOSPH6Q99547 160 aaKnown RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 KIFC3Q9BVG8 833 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 STK33Q9BYT3 514 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 POLR3FQ9H1D9 316 aaPredicted RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 MROH8Q9H579 483 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 MLXIPQ9HAP2 919 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 LUC7LQ9NQ29 371 aaKnown RBP10.45□□□□□ -0.74
TRIM55-201ENST00000276573 NRBP2Q9NSY0 501 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 DNAJC12Q9UKB3 198 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 DAAM1Q9Y4D1 1078 aa10.45□□□□□ -0.74
TRIM55-201ENST00000276573 EMSYQ7Z589 1322 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 ANO9A1A5B4 782 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 H0YCG3 227 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 ENC1O14682 589 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 N4BP1O75113 896 aaKnown RBP10.44□□□□□ -0.74
TRIM55-201ENST00000276573 MOCS3O95396 460 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 FERP16591 822 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 STAT1P42224 750 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 MYL7Q01449 175 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 PPP3CAQ08209 521 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 KCTD2Q14681 263 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 LY6KQ17RY6 165 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 C10orf76Q5T2E6 689 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 KCNV1Q6PIU1 500 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 EEPD1Q7L9B9 569 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 GPR161Q8N6U8 529 aaKnown RBP10.44□□□□□ -0.74
TRIM55-201ENST00000276573 PLEKHO2Q8TD55 490 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 GOLGA1Q92805 767 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 CEP89Q96ST8 783 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 DHX33Q9H6R0 707 aaKnown RBP10.44□□□□□ -0.74
TRIM55-201ENST00000276573 HDAC6Q9UBN7 1215 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 PUF60Q9UHX1 559 aaKnown RBP10.44□□□□□ -0.74
TRIM55-201ENST00000276573 SALL4Q9UJQ4 1053 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 DDX41Q9UJV9 622 aaKnown RBP10.44□□□□□ -0.74
TRIM55-201ENST00000276573 SAR1BQ9Y6B6 198 aa10.44□□□□□ -0.74
TRIM55-201ENST00000276573 GOLGA8IPA6NC78 632 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 GOLGA8JA6NMD2 632 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 PMM2O15305 246 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 GRIN3BO60391 1043 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 GGPS1O95749 300 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 H2AFXP16104 143 aaPredicted RBP10.43□□□□□ -0.74
TRIM55-201ENST00000276573 ANXA13P27216 316 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 ABCD1P33897 745 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 SOX5P35711 763 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 STAT5BP51692 787 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 POLGP54098 1239 aaPredicted RBP10.43□□□□□ -0.74
TRIM55-201ENST00000276573 CHMP4BP1P59074 171 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 TUBB4BP68371 445 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 DRAP1Q14919 205 aaPredicted RBP10.43□□□□□ -0.74
TRIM55-201ENST00000276573 EMC2Q15006 297 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 TARBP2Q15633 366 aaKnown RBP10.43□□□□□ -0.74
TRIM55-201ENST00000276573 BRDTQ58F21 947 aaPredicted RBP10.43□□□□□ -0.74
TRIM55-201ENST00000276573 FAM160B1Q5W0V3 765 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 SLC39A4Q6P5W5 647 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 FBXO38Q6PIJ6 1188 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 METTL7BQ6UX53 244 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 TAS1R3Q7RTX0 852 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 ANKRD13CQ8N6S4 541 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 SHCBP1Q8NEM2 672 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 AFAP1L1Q8TED9 768 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 RABGGTAQ92696 567 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 ARHGAP28Q9P2N2 729 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 APEX2Q9UBZ4 518 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 JRKLQ9Y4A0 524 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 SCN4AP35499 1836 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 ADGRA3Q8IWK6 1321 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 GFPT2O94808 682 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 ARIH2O95376 493 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 TFRCP02786 760 aaKnown RBP10.43□□□□□ -0.74
TRIM55-201ENST00000276573 ADRB2P07550 413 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 GARTP22102 1010 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 ARL2P36404 184 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 ERVK-9P63128 1117 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 CETN1Q12798 172 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 NAB2Q15742 525 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 EPC2Q52LR7 807 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 TEX35Q5T0J7 233 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 MAP1SQ66K74 1059 aaPredicted RBP10.43□□□□□ -0.74
TRIM55-201ENST00000276573 PHLDB3Q6NSJ2 640 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 CBWD2Q8IUF1 395 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 MORC4Q8TE76 937 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 KCNN1Q92952 543 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 TMEM143Q96AN5 459 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 MFSD14AQ96MC6 490 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 FBXL18Q96ME1 805 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 PORCNQ9H237 461 aa10.43□□□□□ -0.74
TRIM55-201ENST00000276573 USP20Q9Y2K6 914 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms