RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 KSR2Q6VAB6 950 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 COL23A1Q86Y22 540 aaPredicted RBP9.89□□□□□ -0.83
PDGFC-201ENST00000274071 SLC7A5P1Q8MH63 180 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 DCAF5Q96JK2 942 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 PPP1R10Q96QC0 940 aaKnown RBP9.89□□□□□ -0.83
PDGFC-201ENST00000274071 SH3GL1Q99961 368 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 HEPHQ9BQS7 1158 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 PABPC3Q9H361 631 aaKnown RBP9.89□□□□□ -0.83
PDGFC-201ENST00000274071 USP29Q9HBJ7 922 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 MLXIPLQ9NP71 852 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 CHKBQ9Y259 395 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 SCN11AQ9UI33 1791 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 PALLDQ8WX93 1383 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 WNT7AO00755 349 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 PSMG1O95456 288 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 EYA4O95677 639 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 HNRNPH3P31942 346 aaKnown RBP9.88□□□□□ -0.83
PDGFC-201ENST00000274071 SLCO1A2P46721 670 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 TMED10P49755 219 aaKnown RBP9.88□□□□□ -0.83
PDGFC-201ENST00000274071 MAP3K10Q02779 954 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 SEC14L1Q92503 715 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 DDX12PQ92771 950 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 PCMTD1Q96MG8 357 aaPredicted RBP9.88□□□□□ -0.83
PDGFC-201ENST00000274071 LRRC37BQ96QE4 947 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 PHF12Q96QT6 1004 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 CCT7Q99832 543 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 EPB41L1Q9H4G0 881 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 SYNCQ9H7C4 482 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 TLE6Q9H808 572 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 TRPC7Q9HCX4 862 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 EXOC1Q9NV70 894 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 SAP30BPQ9UHR5 308 aaKnown RBP9.88□□□□□ -0.83
PDGFC-201ENST00000274071 DBR1Q9UK59 544 aaKnown RBP9.88□□□□□ -0.83
PDGFC-201ENST00000274071 FBXO9Q9UK97 447 aaPredicted RBP9.88□□□□□ -0.83
PDGFC-201ENST00000274071 TRIM17Q9Y577 477 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 POTEFA5A3E0 1075 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 FAM196BA6NMK8 535 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 MATN2O00339 956 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 POTEIP0CG38 1075 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 ENDOUP21128 410 aaKnown RBP9.88□□□□□ -0.83
PDGFC-201ENST00000274071 EEF1GP26641 437 aaKnown RBP9.88□□□□□ -0.83
PDGFC-201ENST00000274071 PRCPP42785 496 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 RASSF2P50749 326 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 PMS1P54277 932 aaKnown RBP9.88□□□□□ -0.83
PDGFC-201ENST00000274071 GFPT1Q06210 699 aaPredicted RBP9.88□□□□□ -0.83
PDGFC-201ENST00000274071 SLC29A2Q14542 456 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 TNFAIP8L3Q5GJ75 292 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 KRT27Q7Z3Y8 459 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 NELFCDQ8IXH7 590 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 NUP93Q8N1F7 819 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 CRAMP1Q96RY5 1269 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 FMO2Q99518 471 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 BHMT2Q9H2M3 363 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 NDUFA13Q9P0J0 144 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 ZNF212Q9UDV6 495 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 NOX1Q9Y5S8 564 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 UMODL1Q5DID0 1318 aa9.88□□□□□ -0.83
PDGFC-201ENST00000274071 CREB1P16220 341 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 SLC1A4P43007 532 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 NAA20P61599 178 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 AIMP1Q12904 312 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 PDIA6Q15084 440 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 DEPDC1Q5TB30 811 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 TOM1L2Q6ZVM7 507 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 TTC30AQ86WT1 665 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 FAM186BQ8IYM0 893 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 CKAP2Q8WWK9 683 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 CEP295NLQ96MC4 621 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 MIPEPQ99797 713 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 NDEL1Q9GZM8 345 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 ZMYND12Q9H0C1 365 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 CUEDC2Q9H467 287 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 PSTPIP2Q9H939 334 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 METTL14Q9HCE5 456 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 TTLL3Q9Y4R7 772 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 WASF2Q9Y6W5 498 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 STK36Q9NRP7 1315 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 MYO5AQ9Y4I1 1855 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 A0A1W2PQ67 120 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 DDX3XO00571 662 aaKnown RBP eCLIP9.87□□□□□ -0.833e-9■■■■□ 26.3
PDGFC-201ENST00000274071 TTI1O43156 1089 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 ADCY3O60266 1144 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 ZNF862O60290 1169 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 HSPA8P11142 646 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 RXRAP19793 462 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 POLGP54098 1239 aaPredicted RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 YARSP54577 528 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 IGBP1P78318 339 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 TRIM29Q14134 588 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 MTFR1Q15390 333 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 DENND2CQ68D51 928 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 IZUMO2Q6UXV1 221 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 RBM44Q6ZP01 1051 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 UNC13DQ70J99 1090 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 PATL1Q86TB9 770 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 EPS8L3Q8TE67 593 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 ARHGEF2Q92974 986 aaKnown RBP9.87□□□□□ -0.83
PDGFC-201ENST00000274071 EEF2KMTQ96G04 330 aa9.87□□□□□ -0.83
PDGFC-201ENST00000274071 ZNF496Q96IT1 587 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms