RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 SYKP43405 635 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 PPP2R5AQ15172 486 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 AMHR2Q16671 573 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 ADAM2Q99965 735 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 NFKBIZQ9BYH8 718 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 INO80BQ9C086 356 aaPredicted RBP14.1□□□□□ -0.15
SS18-202ENST00000269138 ZHX3Q9H4I2 956 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 ODF2LQ9ULJ1 636 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 USP20Q9Y2K6 914 aa14.1□□□□□ -0.15
SS18-202ENST00000269138 TTLL13PA6NNM8 815 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 SLC16A4O15374 487 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 B4GALT5O43286 388 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 SLFN14P0C7P3 912 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 LIG1P18858 919 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 IBSPP21815 317 aaPredicted RBP14.09□□□□□ -0.15
SS18-202ENST00000269138 AFMP43652 599 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 ZNF131P52739 623 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 DMP1Q13316 513 aaPredicted RBP14.09□□□□□ -0.15
SS18-202ENST00000269138 ODR4Q5SWX8 454 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 ZBTB8OSQ8IWT0 167 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 MYCT1Q8N699 235 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 TMEM87AQ8NBN3 555 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 TSPYL2Q9H2G4 693 aaPredicted RBP14.09□□□□□ -0.15
SS18-202ENST00000269138 MTIF3Q9H2K0 278 aaKnown RBP14.09□□□□□ -0.15
SS18-202ENST00000269138 TNMDQ9H2S6 317 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 KMT5AQ9NQR1 393 aa14.09□□□□□ -0.15
SS18-202ENST00000269138 DENND3A2RUS2 1198 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 TSPAN1O60635 241 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 TBCAO75347 108 aaKnown RBP14.08□□□□□ -0.16
SS18-202ENST00000269138 ZNF202O95125 648 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 EDN1P05305 212 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 HOXA11P31270 313 aaPredicted RBP14.08□□□□□ -0.16
SS18-202ENST00000269138 KCNJ6P48051 423 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 CSPP1Q1MSJ5 1256 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 CLEC17AQ6ZS10 378 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 TAS1R3Q7RTX0 852 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 CEP57L1Q8IYX8 460 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 MYOCDQ8IZQ8 938 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 SPIRE2Q8WWL2 714 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 PAGE5Q96GU1 130 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 CPB2Q96IY4 423 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 NTPCRQ9BSD7 190 aaKnown RBP14.08□□□□□ -0.16
SS18-202ENST00000269138 FTHL17Q9BXU8 183 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 TRIM9Q9C026 710 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 CCDC113Q9H0I3 377 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 C2orf40Q9H1Z8 148 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 BLZF1Q9H2G9 400 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 FZD8Q9H461 694 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 C17orf75Q9HAS0 396 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 PARVGQ9HBI0 331 aa14.08□□□□□ -0.16
SS18-202ENST00000269138 PIN4Q9Y237 131 aaKnown RBP14.08□□□□□ -0.16
SS18-202ENST00000269138 A0A1W2PPC1 479 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 EFCAB14O75071 495 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 PRPF40AO75400 957 aaKnown RBP14.07□□□□□ -0.16
SS18-202ENST00000269138 IDEP14735 1019 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 ATP2A2P16615 1042 aaKnown RBP14.07□□□□□ -0.16
SS18-202ENST00000269138 RABGGTBP53611 331 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 SNW1Q13573 536 aaKnown RBP14.07□□□□□ -0.16
SS18-202ENST00000269138 CUL4BQ13620 913 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 FAM117BQ6P1L5 589 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 SFR1Q86XK3 245 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 FMR1NBQ8N0W7 255 aaPredicted RBP14.07□□□□□ -0.16
SS18-202ENST00000269138 TMEM161BQ8NDZ6 487 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 ENGASEQ8NFI3 743 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 FIZ1Q96SL8 496 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 C7orf25Q9BPX7 421 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 PYM1Q9BRP8 204 aaKnown RBP14.07□□□□□ -0.16
SS18-202ENST00000269138 TRIOBPQ9H2D6 2365 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 MAGEF1Q9HAY2 307 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 RGS18Q9NS28 235 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 AGPAT5Q9NUQ2 364 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 ARHGAP28Q9P2N2 729 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 USP25Q9UHP3 1055 aa14.07□□□□□ -0.16
SS18-202ENST00000269138 C9IYK1 514 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 ERLIN2O94905 339 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 UPP2O95045 317 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 AMHP03971 560 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 PRKCBP05771 671 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 ZSCAN20P17040 1043 aaPredicted RBP14.06□□□□□ -0.16
SS18-202ENST00000269138 ARF4P18085 180 aaPredicted RBP14.06□□□□□ -0.16
SS18-202ENST00000269138 NMT1P30419 496 aaKnown RBP14.06□□□□□ -0.16
SS18-202ENST00000269138 EFNA5P52803 228 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 ASIC1P78348 528 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 AMPD3Q01432 767 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 NT5DC1Q5TFE4 455 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 KRBA2Q6ZNG9 492 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 CDR2LQ86X02 465 aaPredicted RBP14.06□□□□□ -0.16
SS18-202ENST00000269138 HERC6Q8IVU3 1022 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 SLC9A7Q96T83 725 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 LRRC27Q9C0I9 530 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 CHST12Q9NRB3 414 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 PANK4Q9NVE7 773 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 TBC1D7Q9P0N9 293 aa14.06□□□□□ -0.16
SS18-202ENST00000269138 LARSQ9P2J5 1176 aaKnown RBP14.06□□□□□ -0.16
SS18-202ENST00000269138 FRMD3A2A2Y4 597 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 K7ERI5 159 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 SOX1O00570 391 aaPredicted RBP14.05□□□□□ -0.16
SS18-202ENST00000269138 TRAK2O60296 914 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 PRR29P0C7W0 189 aa14.05□□□□□ -0.16
SS18-202ENST00000269138 MAPTP10636 758 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms