RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ZNF408Q9H9D4 720 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 LRRC4CQ9HCJ2 640 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 PANK4Q9NVE7 773 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 FBXL5Q9UKA1 691 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 C15orf41Q9Y2V0 281 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 PVALEFA0A1B0GWK0 134 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 CLTAP09496 248 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 COASYQ13057 564 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 BIRC3Q13489 604 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 NAB2Q15742 525 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 MAN2A1Q16706 1144 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 RUFY4Q6ZNE9 571 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 PNMA8AQ86V59 439 aaPredicted RBP17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 GMCL1P1Q8NEA9 526 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 TANGO6Q9C0B7 1094 aa17.28■□□□□ 0.36
MAP1LC3B-201ENST00000268607 SSU72P8A0A1W2PR75 194 aa17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 SPDYE3A6NKU9 549 aa17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 DNAJC8O75937 253 aaPredicted RBP17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 HMGCS2P54868 508 aa17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 ENOX2Q16206 610 aaKnown RBP17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 DPY19L2Q6NUT2 758 aa17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 MIS18BP1Q6P0N0 1132 aa17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 MDM1Q8TC05 714 aa17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 LRRC45Q96CN5 670 aa17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 PACSIN1Q9BY11 444 aa17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 YIPF3Q9GZM5 350 aa17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 KCNMB3Q9NPA1 279 aa17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 DNAH12Q6ZR08 3092 aa17.27■□□□□ 0.36
MAP1LC3B-201ENST00000268607 KCNK3O14649 394 aa17.27■□□□□ 0.35
MAP1LC3B-201ENST00000268607 TLR2O60603 784 aa17.27■□□□□ 0.35
MAP1LC3B-201ENST00000268607 PLA2G4BP0C869 781 aa17.27■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CYP4A11Q02928 519 aa17.27■□□□□ 0.35
MAP1LC3B-201ENST00000268607 GPBP1Q86WP2 473 aa17.27■□□□□ 0.35
MAP1LC3B-201ENST00000268607 AGBL1Q96MI9 1066 aa17.27■□□□□ 0.35
MAP1LC3B-201ENST00000268607 AP1M1Q9BXS5 423 aa17.27■□□□□ 0.35
MAP1LC3B-201ENST00000268607 GOPCQ9HD26 462 aa17.27■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ADARB2Q9NS39 739 aaKnown RBP17.27■□□□□ 0.35
MAP1LC3B-201ENST00000268607 IRAK4Q9NWZ3 460 aa17.27■□□□□ 0.35
MAP1LC3B-201ENST00000268607 PECAM1P16284 738 aaPredicted RBP17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 DRD4P21917 467 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 USP11P51784 963 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 MAP3K10Q02779 954 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ARID5AQ03989 594 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 GUF1Q8N442 669 aaKnown RBP17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 DCPSQ96C86 337 aaKnown RBP17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 GMCL1Q96IK5 515 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CLMNQ96JQ2 1002 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 KDM4CQ9H3R0 1056 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 GOLPH3Q9H4A6 298 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 BCAS3Q9H6U6 928 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 TMEM59LQ9UK28 342 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CEP350Q5VT06 3117 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 RBAK-RBAKDNI3L0D1 243 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CFBP00751 764 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 KRT18P05783 430 aaKnown RBP17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SLC9C1Q4G0N8 1177 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 HERC4Q5GLZ8 1057 aaPredicted RBP17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SULF1Q8IWU6 871 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 BORCS6Q96GS4 357 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ZNF570Q96NI8 536 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
MAP1LC3B-201ENST00000268607 TRAF5O00463 557 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CAND2O75155 1236 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SMNDC1O75940 238 aaKnown RBP eCLIP17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 PAEPP09466 180 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 KCNMA1Q12791 1236 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 PABPC4Q13310 644 aaKnown RBP eCLIP17.25■□□□□ 0.353e-7■■□□□ 13.3
MAP1LC3B-201ENST00000268607 TTLL12Q14166 644 aaPredicted RBP17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 KIAA0753Q2KHM9 967 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 FAM26FQ5R3K3 315 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CATSPER3Q86XQ3 398 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 BMP2KQ9NSY1 1161 aaPredicted RBP17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 EMILIN3Q9NT22 766 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 PCDHGC5Q9Y5F6 944 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CTNND1O60716 968 aaKnown RBP17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 PTPRAP18433 802 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 EPHX2P34913 555 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CUL1Q13616 776 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 KRT71Q3SY84 523 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 MAP1SQ66K74 1059 aaPredicted RBP17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ARMC9Q7Z3E5 817 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 APOBEC3FQ8IUX4 373 aaKnown RBP17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 MYOCDQ8IZQ8 938 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 TAF4BQ92750 862 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 KLRG1Q96E93 195 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SSC5DA1L4H1 1573 aa17.25■□□□□ 0.35
MAP1LC3B-201ENST00000268607 USP2O75604 605 aaPredicted RBP17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ZNF76P36508 570 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 AGBL2Q5U5Z8 902 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 SFMBT2Q5VUG0 894 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CEP104O60308 925 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 FLOT1O75955 427 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 UPP2O95045 317 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 GHRP10912 638 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 ETNPPLQ8TBG4 499 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 LENG9Q96B70 501 aa17.24■□□□□ 0.35
MAP1LC3B-201ENST00000268607 CHMP6Q96FZ7 201 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms