RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 TCRBV5S4A2TA0A5A2 114 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 RPA1P27694 616 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 HOXD10P28358 340 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 HUNKP57058 714 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 TRIP13Q15645 432 aaPredicted RBP16.51■□□□□ 0.23
TIMP3-201ENST00000266085 LMBRD2Q68DH5 695 aaPredicted RBP16.51■□□□□ 0.23
TIMP3-201ENST00000266085 SPATS2Q86XZ4 545 aaKnown RBP16.51■□□□□ 0.23
TIMP3-201ENST00000266085 PDIK1LQ8N165 341 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 BEST2Q8NFU1 509 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 SCYL1Q96KG9 808 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 KCNH7Q9NS40 1196 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 LIMA1Q9UHB6 759 aaKnown RBP16.51■□□□□ 0.23
TIMP3-201ENST00000266085 CCL15-CCL14A0A0B4J2E2 113 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 RGL2O15211 777 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 CUL1Q13616 776 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 CCL15Q16663 113 aa16.51■□□□□ 0.23
TIMP3-201ENST00000266085 KSR1Q8IVT5 923 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 CFAP57Q96MR6 1250 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 CAPN11Q9UMQ6 739 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 ZBED1O96006 694 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 DUOXA2Q1HG44 320 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 ENOSF1Q7L5Y1 443 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 FAN1Q9Y2M0 1017 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 PODXLO00592 558 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 GLE1Q53GS7 698 aaKnown RBP16.5■□□□□ 0.23
TIMP3-201ENST00000266085 PLA2G4FQ68DD2 849 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 FBXO38Q6PIJ6 1188 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 OR6J1Q8NGC5 347 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 NCAPGQ9BPX3 1015 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 TIPINQ9BVW5 301 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 ABCB6Q9NP58 842 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 CPSF3Q9UKF6 684 aaKnown RBP16.5■□□□□ 0.23
TIMP3-201ENST00000266085 SRGAP2O75044 1071 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 TJP3O95049 919 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 CALB1P05937 261 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 MRPS25P82663 173 aaKnown RBP16.5■□□□□ 0.23
TIMP3-201ENST00000266085 GLYCTKQ8IVS8 523 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 TAAR1Q96RJ0 339 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 ZWILCHQ9H900 591 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 BAIAP2L1Q9UHR4 511 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 STRIP2Q9ULQ0 834 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 TACC3Q9Y6A5 838 aa16.5■□□□□ 0.23
TIMP3-201ENST00000266085 A0A1B0GTH6 734 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 PCK1P35558 622 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 MSH2P43246 934 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 PSMD6Q15008 389 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 BBS9Q3SYG4 887 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 PPP6R3Q5H9R7 873 aaPredicted RBP16.49■□□□□ 0.23
TIMP3-201ENST00000266085 PTF1AQ7RTS3 328 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 RBM41Q96IZ5 413 aaKnown RBP16.49■□□□□ 0.23
TIMP3-201ENST00000266085 SUCLA2Q9P2R7 463 aaPredicted RBP16.49■□□□□ 0.23
TIMP3-201ENST00000266085 NFU1Q9UMS0 254 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 FAM205AQ6ZU69 1335 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 WTIPA6NIX2 430 aaPredicted RBP16.49■□□□□ 0.23
TIMP3-201ENST00000266085 SLC25A27O95847 323 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 FTLP02792 175 aaPredicted RBP16.49■□□□□ 0.23
TIMP3-201ENST00000266085 ARL13BQ3SXY8 428 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 PARK7Q99497 189 aaKnown RBP16.49■□□□□ 0.23
TIMP3-201ENST00000266085 RASGRF2O14827 1237 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 ZBTB24O43167 697 aaPredicted RBP16.49■□□□□ 0.23
TIMP3-201ENST00000266085 CYP2B6P20813 491 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 ELF1P32519 619 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 SLCO1A2P46721 670 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 NPEPPSP55786 919 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 ALS2CLQ60I27 953 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 TTC19Q6DKK2 380 aaPredicted RBP16.49■□□□□ 0.23
TIMP3-201ENST00000266085 BZW1Q7L1Q6 419 aaKnown RBP16.49■□□□□ 0.23
TIMP3-201ENST00000266085 SMARCAD1Q9H4L7 1026 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 FAM217BQ9NTX9 383 aaPredicted RBP16.49■□□□□ 0.23
TIMP3-201ENST00000266085 MAFGO15525 162 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 PRKCBP05771 671 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 GSTA1P08263 222 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 GSTA2P09210 222 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 CIITAP33076 1130 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 FXR2P51116 673 aaKnown RBP eCLIP16.49■□□□□ 0.23
TIMP3-201ENST00000266085 CALR3Q96L12 384 aaKnown RBP16.49■□□□□ 0.23
TIMP3-201ENST00000266085 EHD4Q9H223 541 aa16.49■□□□□ 0.23
TIMP3-201ENST00000266085 ANXA13P27216 316 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 EIF3BP55884 814 aaKnown RBP16.48■□□□□ 0.23
TIMP3-201ENST00000266085 ADCY1Q08828 1119 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 TFDP2Q14188 446 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 CHST13Q8NET6 341 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 PLSCR1O15162 318 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 SUN1O94901 812 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 C6orf222P0C671 652 aaPredicted RBP16.48■□□□□ 0.23
TIMP3-201ENST00000266085 ACOT2P49753 483 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 NBPF12Q5TAG4 269 aaPredicted RBP16.48■□□□□ 0.23
TIMP3-201ENST00000266085 C9orf131Q5VYM1 1079 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 GINM1Q9NU53 330 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 UBE4BO95155 1302 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 SLC26A4O43511 780 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 SLC37A4O43826 429 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 HOXA10P31260 410 aaPredicted RBP16.48■□□□□ 0.23
TIMP3-201ENST00000266085 PRKCEQ02156 737 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 C4orf50Q6ZRC1 276 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 DAGLBQ8NCG7 672 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 KCND2Q9NZV8 630 aa16.48■□□□□ 0.23
TIMP3-201ENST00000266085 EXOC1LA0A1B0GW35 172 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 ICAM1P05362 532 aa16.47■□□□□ 0.23
TIMP3-201ENST00000266085 GNA15P30679 374 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms