RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 CDR2LQ86X02 465 aaPredicted RBP10.12□□□□□ -0.79
SSR3-201ENST00000265044 TRIM59Q8IWR1 403 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 TRAPPC12Q8WVT3 735 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 PRPF31Q8WWY3 499 aaKnown RBP10.12□□□□□ -0.79
SSR3-201ENST00000265044 NT5C1BQ96P26 610 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 C1orf112Q9NSG2 853 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.12□□□□□ -0.79
SSR3-201ENST00000265044 AGO2Q9UKV8 859 aaKnown RBP10.12□□□□□ -0.79
SSR3-201ENST00000265044 IGSF9BQ9UPX0 1349 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 SLC16A3O15427 465 aaKnown RBP10.12□□□□□ -0.79
SSR3-201ENST00000265044 MYL3P08590 195 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 TMEM191BP0C7N4 346 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 FMO5P49326 533 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 TBX2Q13207 712 aaPredicted RBP10.12□□□□□ -0.79
SSR3-201ENST00000265044 SLFN12LQ6IEE8 588 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 EFCAB12Q6NXP0 572 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 FMNL3Q8IVF7 1028 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 MYRIPQ8NFW9 859 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 KCTD10Q9H3F6 313 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 SERPING1P05155 500 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 UCHL3P15374 230 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 PIK3CAP42336 1068 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 CLCN3P51790 818 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 SP2Q02086 613 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 GFPT1Q06210 699 aaPredicted RBP10.12□□□□□ -0.79
SSR3-201ENST00000265044 IFI16Q16666 785 aaKnown RBP10.12□□□□□ -0.79
SSR3-201ENST00000265044 GPR142Q7Z601 462 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 CBWD2Q8IUF1 395 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 CTNNBL1Q8WYA6 563 aaPredicted RBP10.12□□□□□ -0.79
SSR3-201ENST00000265044 NOX5Q96PH1 765 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 ADPGKQ9BRR6 497 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 QSER1Q2KHR3 1735 aa10.12□□□□□ -0.79
SSR3-201ENST00000265044 NFASCO94856 1347 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 MANSC4A6NHS7 340 aaPredicted RBP10.11□□□□□ -0.79
SSR3-201ENST00000265044 TMEM110-MUSTN1A8MSY1 372 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 MYCP01106 439 aaPredicted RBP10.11□□□□□ -0.79
SSR3-201ENST00000265044 PLEKP08567 350 aaPredicted RBP10.11□□□□□ -0.79
SSR3-201ENST00000265044 ABCD1P33897 745 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 RNASE9P60153 205 aaKnown RBP10.11□□□□□ -0.79
SSR3-201ENST00000265044 SEZ6Q53EL9 994 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 ABHD15Q6UXT9 468 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 GPD1LQ8N335 351 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 C17orf75Q9HAS0 396 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 TFR2Q9UP52 801 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 CTAGE15A4D2H0 777 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 DYNC1I1O14576 645 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 HBP1O60381 514 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 FARP2O94887 1054 aaPredicted RBP10.11□□□□□ -0.79
SSR3-201ENST00000265044 CTAGE8P0CG41 777 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 RFC5P40937 340 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 TNFAIP2Q03169 654 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 TMEM62Q0P6H9 643 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 MIIPQ5JXC2 388 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 PRAMEF19Q5SWL8 479 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 GJB7Q6PEY0 223 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 CTAGE6Q86UF2 777 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 CTAGE4Q8IX94 777 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 BBXQ8WY36 941 aaPredicted RBP10.11□□□□□ -0.79
SSR3-201ENST00000265044 MKNK1Q9BUB5 465 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 ADAMTS5Q9UNA0 930 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 FHOD1Q9Y613 1164 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 MYH15Q9Y2K3 1946 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 ASTN1O14525 1302 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 TGFB1I1O43294 461 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 CSDE1O75534 798 aaKnown RBP10.11□□□□□ -0.79
SSR3-201ENST00000265044 ZNF286BP0CG31 522 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 FERP16591 822 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 DRAP1Q14919 205 aaPredicted RBP10.11□□□□□ -0.79
SSR3-201ENST00000265044 LDLRAD1Q5T700 205 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 RGMBQ6NW40 437 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 PDXDC1Q6P996 788 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 APOL6Q9BWW8 343 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 DDX41Q9UJV9 622 aaKnown RBP10.11□□□□□ -0.79
SSR3-201ENST00000265044 PCDHA13Q9Y5I0 950 aa10.11□□□□□ -0.79
SSR3-201ENST00000265044 UBE4BO95155 1302 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 RNF225M0QZC1 329 aaPredicted RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 RGS20O76081 388 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 C6orf222P0C671 652 aaPredicted RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 PNMA6AP0CW24 399 aaPredicted RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 MFAP3P55082 362 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 PPFIA1Q13136 1202 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 MXD4Q14582 209 aaPredicted RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 ZNF568Q3ZCX4 644 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 COBLL1Q53SF7 1204 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 CELF3Q5SZQ8 465 aaKnown RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 PDCL2Q8N4E4 241 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 MRPL4Q9BYD3 311 aaKnown RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 INTS2Q9H0H0 1204 aaKnown RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 RBAKQ9NYW8 714 aaPredicted RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 CGNQ9P2M7 1197 aaKnown RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 BZW2Q9Y6E2 419 aaKnown RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 LYPLA2O95372 231 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 LDHAP00338 332 aaKnown RBP10.1□□□□□ -0.79
SSR3-201ENST00000265044 PRKCBP05771 671 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 CYP2C19P33261 490 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 SREBF2Q12772 1141 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 IER5Q5VY09 327 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 KRT39Q6A163 491 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 IQCEQ6IPM2 695 aa10.1□□□□□ -0.79
SSR3-201ENST00000265044 APTXQ7Z2E3 356 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms